RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 hCG_1984214I3L0E3 225 aa24.4■■□□□ 1.5
CIRBP-222ENST00000589235 CXCL10P02778 98 aa24.4■■□□□ 1.5
CIRBP-222ENST00000589235 SEMA3FQ13275 785 aa24.4■■□□□ 1.5
CIRBP-222ENST00000589235 PPP1R18Q6NYC8 613 aa24.4■■□□□ 1.5
CIRBP-222ENST00000589235 HERC6Q8IVU3 1022 aa24.4■■□□□ 1.5
CIRBP-222ENST00000589235 ZNF713Q8N859 430 aaPredicted RBP24.4■■□□□ 1.5
CIRBP-222ENST00000589235 GLT8D2Q9H1C3 349 aa24.4■■□□□ 1.5
CIRBP-222ENST00000589235 PCDHA6Q9UN73 950 aa24.4■■□□□ 1.5
CIRBP-222ENST00000589235 PCDHA8Q9Y5H6 950 aa24.4■■□□□ 1.5
CIRBP-222ENST00000589235 CCDC196A0A1B0GTZ2 297 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 ABHD14A-ACY1A0A1B0GW23 586 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 SMIM10L2AP0DMW4 78 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 SMIM10L2BP0DMW5 78 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 MYOGP15173 224 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 THPOP40225 353 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 RCAN1P53805 252 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 NAPAP54920 295 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 ZNF200P98182 395 aaPredicted RBP24.39■■□□□ 1.49
CIRBP-222ENST00000589235 IKBKEQ14164 716 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 ZNF618Q5T7W0 954 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 UTP14CQ5TAP6 766 aaKnown RBP24.39■■□□□ 1.49
CIRBP-222ENST00000589235 SERINC5Q86VE9 423 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 RASEFQ8IZ41 740 aa24.39■■□□□ 1.49
CIRBP-222ENST00000589235 NAP1L2Q9ULW6 460 aaPredicted RBP24.39■■□□□ 1.49
CIRBP-222ENST00000589235 COL6A3P12111 3177 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 KLF18A0A0U1RQI7 1052 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 GOLGA8AA7E2F4 631 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 GOLGA8BA8MQT2 603 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 RSPH10B2B2RC85 870 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 FOSP01100 380 aaPredicted RBP24.38■■□□□ 1.49
CIRBP-222ENST00000589235 RSPH10BP0C881 870 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 MTMR1Q13613 665 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 UBE2SQ16763 222 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 TRIM71Q2Q1W2 868 aaKnown RBP24.38■■□□□ 1.49
CIRBP-222ENST00000589235 ADCK5Q3MIX3 580 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 TCEANC2Q96MN5 208 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 ZBED2Q9BTP6 218 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 RNPEPQ9H4A4 650 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 BCAS3Q9H6U6 928 aa24.38■■□□□ 1.49
CIRBP-222ENST00000589235 V9GY48 417 aaPredicted RBP24.38■■□□□ 1.49
CIRBP-222ENST00000589235 TLL1O43897 1013 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 NBNO60934 754 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 CAND2O75155 1236 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 CA3P07451 260 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 SP4Q02446 784 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 PPM1EQ8WY54 764 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 SEPT1Q8WYJ6 367 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 SYMPKQ92797 1274 aaKnown RBP24.37■■□□□ 1.49
CIRBP-222ENST00000589235 JADE2Q9NQC1 790 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 BRPF3Q9ULD4 1205 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 UBIAD1Q9Y5Z9 338 aa24.37■■□□□ 1.49
CIRBP-222ENST00000589235 CNTNAP5Q8WYK1 1306 aa24.36■■□□□ 1.49
CIRBP-222ENST00000589235 REC8O95072 547 aa24.36■■□□□ 1.49
CIRBP-222ENST00000589235 ADCY7P51828 1080 aa24.36■■□□□ 1.49
CIRBP-222ENST00000589235 WDR5P61964 334 aaKnown RBP24.36■■□□□ 1.49
CIRBP-222ENST00000589235 GPNMBQ14956 572 aa24.36■■□□□ 1.49
CIRBP-222ENST00000589235 WWC2Q6AWC2 1192 aa24.36■■□□□ 1.49
CIRBP-222ENST00000589235 TSPYL2Q9H2G4 693 aaPredicted RBP24.36■■□□□ 1.49
CIRBP-222ENST00000589235 RIC8AQ9NPQ8 531 aa24.36■■□□□ 1.49
CIRBP-222ENST00000589235 MYH7BA7E2Y1 1941 aa24.35■■□□□ 1.49
CIRBP-222ENST00000589235 TANC1Q9C0D5 1861 aa24.35■■□□□ 1.49
CIRBP-222ENST00000589235 TREHO43280 583 aa24.35■■□□□ 1.49
CIRBP-222ENST00000589235 LGR5O75473 907 aa24.35■■□□□ 1.49
CIRBP-222ENST00000589235 ITGB5P18084 799 aa24.35■■□□□ 1.49
CIRBP-222ENST00000589235 HOXC8P31273 242 aa24.35■■□□□ 1.49
CIRBP-222ENST00000589235 TCF7P36402 384 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-222ENST00000589235 BLOC1S2Q6QNY1 142 aa24.35■■□□□ 1.49
CIRBP-222ENST00000589235 TNPO1Q92973 898 aaKnown RBP24.35■■□□□ 1.49
CIRBP-222ENST00000589235 COL25A1Q9BXS0 654 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-222ENST00000589235 NRCAMQ92823 1304 aa24.35■■□□□ 1.49
CIRBP-222ENST00000589235 SMCO2A6NFE2 343 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 GTPBP6O43824 516 aaPredicted RBP24.34■■□□□ 1.49
CIRBP-222ENST00000589235 KCNA2P16389 499 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 PSMA5P28066 241 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 HSPA4P34932 840 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 METAP2P50579 478 aaKnown RBP eCLIP24.34■■□□□ 1.49
CIRBP-222ENST00000589235 ADGRE1Q14246 886 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 HIC1Q14526 733 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 KCNB2Q92953 911 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 WNT8BQ93098 351 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 JAKMIP1Q96N16 626 aaKnown RBP24.34■■□□□ 1.49
CIRBP-222ENST00000589235 SETD4Q9NVD3 440 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 BARHL2Q9NY43 387 aa24.34■■□□□ 1.49
CIRBP-222ENST00000589235 LAMA2P24043 3122 aaKnown RBP24.33■■□□□ 1.49
CIRBP-222ENST00000589235 ATP9AO75110 1047 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 NEFLP07196 543 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 ARHGAP4P98171 946 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 AP3B2Q13367 1082 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 TRAF7Q6Q0C0 670 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 Q6ZUG5 572 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 GLG1Q92896 1179 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 MXRA8Q9BRK3 442 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 SMARCAD1Q9H4L7 1026 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 ERAP1Q9NZ08 941 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 SCN5AQ14524 2016 aa24.33■■□□□ 1.49
CIRBP-222ENST00000589235 AMHP03971 560 aa24.32■■□□□ 1.48
CIRBP-222ENST00000589235 FUT2Q10981 343 aa24.32■■□□□ 1.48
CIRBP-222ENST00000589235 TRIM50Q86XT4 487 aa24.32■■□□□ 1.48
CIRBP-222ENST00000589235 CCDC12Q8WUD4 166 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-222ENST00000589235 SDF4Q9BRK5 362 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms