RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 TTYH3Q9C0H2 523 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 GINM1Q9NU53 330 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 EPN1Q9Y6I3 576 aaPredicted RBP16.94■□□□□ 0.3
MBD1-217ENST00000588937 SBF1O95248 1867 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 FRMD3A2A2Y4 597 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 CFBP00751 764 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 RPS12P25398 132 aaKnown RBP16.94■□□□□ 0.3
MBD1-217ENST00000588937 MEA1Q16626 185 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 HERC4Q5GLZ8 1057 aaPredicted RBP16.94■□□□□ 0.3
MBD1-217ENST00000588937 CCDC174Q6PII3 467 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 SYT2Q8N9I0 419 aaPredicted RBP16.94■□□□□ 0.3
MBD1-217ENST00000588937 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
MBD1-217ENST00000588937 NDST4Q9H3R1 872 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 RABGAP1Q9Y3P9 1069 aa16.94■□□□□ 0.3
MBD1-217ENST00000588937 POTEFA5A3E0 1075 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 NDUFA10O95299 355 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 POTEIP0CG38 1075 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 CYLC1P35663 651 aaPredicted RBP16.93■□□□□ 0.3
MBD1-217ENST00000588937 PRELPP51888 382 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 NAA30Q147X3 362 aaPredicted RBP16.93■□□□□ 0.3
MBD1-217ENST00000588937 KIF4BQ2VIQ3 1234 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 POTEGQ6S5H5 508 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 POTEEQ6S8J3 1075 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 LRRC55Q6ZSA7 311 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 CCDC170Q8IYT3 715 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 EEF2KMTQ96G04 330 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 CCDC94Q9BW85 323 aaPredicted RBP16.93■□□□□ 0.3
MBD1-217ENST00000588937 PGAP2Q9UHJ9 254 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 VAV3Q9UKW4 847 aa16.93■□□□□ 0.3
MBD1-217ENST00000588937 EFCAB8A8MWE9 144 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 KRT83P78385 493 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 CDK17Q00537 523 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 LRRC41Q15345 812 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 ZCWPW2Q504Y3 356 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 ACRBPQ8NEB7 543 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 UBXN4Q92575 508 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 UIMC1Q96RL1 719 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 PCDHA2Q9Y5H9 948 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 COL4A3BPQ9Y5P4 624 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 MRFAP1Q9Y605 127 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 ATAD5Q96QE3 1844 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 TRAF5O00463 557 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 FANCGO15287 622 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 IPO7O95373 1038 aaKnown RBP16.92■□□□□ 0.3
MBD1-217ENST00000588937 SPATA31C1P0DKV0 1188 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 ELF2Q15723 593 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 NBPF9Q3BBW0 867 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 CHP1Q99653 195 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 FEZ1Q99689 392 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 SLF1Q9BQI6 1058 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 SYT17Q9BSW7 474 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 DEFB129Q9H1M3 183 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 EMILIN3Q9NT22 766 aa16.92■□□□□ 0.3
MBD1-217ENST00000588937 IGLV3-22A0A075B6J6 115 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 MUTP22033 750 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 ZNF280AP59817 542 aaPredicted RBP16.91■□□□□ 0.3
MBD1-217ENST00000588937 SETQ01105 290 aaPredicted RBP16.91■□□□□ 0.3
MBD1-217ENST00000588937 ZYXQ15942 572 aaKnown RBP16.91■□□□□ 0.3
MBD1-217ENST00000588937 ARSHQ5FYA8 562 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 ZNF569Q5MCW4 686 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 ZNF662Q6ZS27 426 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 LPAR1Q92633 364 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 EIF2AK1Q9BQI3 630 aaKnown RBP16.91■□□□□ 0.3
MBD1-217ENST00000588937 EDEM3Q9BZQ6 932 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 AGPAT5Q9NUQ2 364 aa16.91■□□□□ 0.3
MBD1-217ENST00000588937 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.3
MBD1-217ENST00000588937 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
MBD1-217ENST00000588937 CTAGE9A4FU28 777 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 EYA4O95677 639 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 TAL1P17542 331 aaPredicted RBP16.9■□□□□ 0.3
MBD1-217ENST00000588937 RASSF7Q02833 373 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 PPP2R5CQ13362 524 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 GIT2Q14161 759 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 RASA3Q14644 834 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 EDRF1Q3B7T1 1238 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 CCDC40Q4G0X9 1142 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 LRCH2Q5VUJ6 765 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 WDR59Q6PJI9 974 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 LDHDQ86WU2 507 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 CARD6Q9BX69 1037 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 HAUS4Q9H6D7 363 aa16.9■□□□□ 0.3
MBD1-217ENST00000588937 WDR46O15213 610 aaKnown RBP16.89■□□□□ 0.3
MBD1-217ENST00000588937 MARSP56192 900 aaKnown RBP16.89■□□□□ 0.3
MBD1-217ENST00000588937 PPP2R3AQ06190 1150 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 PABPC4Q13310 644 aaKnown RBP eCLIP16.89■□□□□ 0.3
MBD1-217ENST00000588937 ERCC6LQ2NKX8 1250 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 OTOP1Q7RTM1 612 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 KRT26Q7Z3Y9 468 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 GLIS3Q8NEA6 775 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 CYP2W1Q8TAV3 490 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 SCFD1Q8WVM8 642 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 SLC5A5Q92911 643 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 ZNF341Q9BYN7 854 aa16.89■□□□□ 0.3
MBD1-217ENST00000588937 WDR11Q9BZH6 1224 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms