RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CPA4Q9UI42 421 aa25.02■■□□□ 1.6
ATG4D-209ENST00000588857 DNAJC25-GNG10A0A024R161 153 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 MAFGO15525 162 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 CCDC192P0DO97 292 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 GNPTABQ3T906 1256 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 HAUS3Q68CZ6 603 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 INPP4AQ96PE3 977 aaPredicted RBP25.01■■□□□ 1.59
ATG4D-209ENST00000588857 PLIN2Q99541 437 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 KIAA1468Q9P260 1216 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 ASTN1O14525 1302 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 ADGRA2Q96PE1 1338 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 SLC26A4O43511 780 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 EIF3JO75822 258 aaKnown RBP25.01■■□□□ 1.59
ATG4D-209ENST00000588857 PLCG1P19174 1290 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 MAPK4P31152 587 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 CCT6AP40227 531 aaKnown RBP25.01■■□□□ 1.59
ATG4D-209ENST00000588857 PDE4DQ08499 809 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 CRHR2Q13324 411 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 POSTNQ15063 836 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 OTOP1Q7RTM1 612 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 ABRAQ8N0Z2 381 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 CDHR1Q96JP9 859 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 TSPY26PQ9H489 355 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 PKD2L1Q9P0L9 805 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 KDM3AQ9Y4C1 1321 aa25.01■■□□□ 1.59
ATG4D-209ENST00000588857 PPP2R5CQ13362 524 aa25■■□□□ 1.59
ATG4D-209ENST00000588857 PNOCQ13519 176 aa25■■□□□ 1.59
ATG4D-209ENST00000588857 PDXDC2PQ6P474 469 aa25■■□□□ 1.59
ATG4D-209ENST00000588857 ERCC4Q92889 916 aaPredicted RBP25■■□□□ 1.59
ATG4D-209ENST00000588857 PAGE5Q96GU1 130 aa25■■□□□ 1.59
ATG4D-209ENST00000588857 CUEDC2Q9H467 287 aa25■■□□□ 1.59
ATG4D-209ENST00000588857 TBC1D22BQ9NU19 505 aa25■■□□□ 1.59
ATG4D-209ENST00000588857 TLR2O60603 784 aa24.99■■□□□ 1.59
ATG4D-209ENST00000588857 FKTNO75072 461 aa24.99■■□□□ 1.59
ATG4D-209ENST00000588857 MDM2Q00987 491 aaPredicted RBP24.99■■□□□ 1.59
ATG4D-209ENST00000588857 NUDT12Q9BQG2 462 aa24.99■■□□□ 1.59
ATG4D-209ENST00000588857 NT5C3AQ9H0P0 336 aa24.99■■□□□ 1.59
ATG4D-209ENST00000588857 CASP8AP2Q9UKL3 1982 aa24.99■■□□□ 1.59
ATG4D-209ENST00000588857 EDNRBP24530 442 aa24.98■■□□□ 1.59
ATG4D-209ENST00000588857 AFMP43652 599 aa24.98■■□□□ 1.59
ATG4D-209ENST00000588857 GRB10Q13322 594 aa24.98■■□□□ 1.59
ATG4D-209ENST00000588857 GPR142Q7Z601 462 aa24.98■■□□□ 1.59
ATG4D-209ENST00000588857 PLEKHH3Q7Z736 793 aa24.98■■□□□ 1.59
ATG4D-209ENST00000588857 MCOLN1Q9GZU1 580 aa24.98■■□□□ 1.59
ATG4D-209ENST00000588857 MAGEF1Q9HAY2 307 aa24.98■■□□□ 1.59
ATG4D-209ENST00000588857 MCM3APO60318 1980 aa24.98■■□□□ 1.59
ATG4D-209ENST00000588857 LRRC37A2A6NM11 1700 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 CHMP2AO43633 222 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 ADORA2AP29274 412 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 TYRO3Q06418 890 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 ITGB3BPQ13352 177 aaPredicted RBP24.97■■□□□ 1.59
ATG4D-209ENST00000588857 SH3RF1Q7Z6J0 888 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 GRAMD1CQ8IYS0 662 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 PNMA5Q96PV4 448 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 FUCA2Q9BTY2 467 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 STK17AQ9UEE5 414 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 TCEAL9Q9UHQ7 104 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 LOC102724159A0A0B4J2E5 919 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 DDX39AO00148 427 aaKnown RBP24.97■■□□□ 1.59
ATG4D-209ENST00000588857 RGS20O76081 388 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 PWP2Q15269 919 aaKnown RBP24.97■■□□□ 1.59
ATG4D-209ENST00000588857 NAALADL2Q58DX5 795 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 C17orf99Q6UX52 265 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 GAS2L3Q86XJ1 694 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 UNC45AQ9H3U1 944 aa24.97■■□□□ 1.59
ATG4D-209ENST00000588857 GOLGA6L3A6NEY3 463 aa24.96■■□□□ 1.59
ATG4D-209ENST00000588857 DHX15O43143 795 aaKnown RBP24.96■■□□□ 1.59
ATG4D-209ENST00000588857 SMC2O95347 1197 aa24.96■■□□□ 1.59
ATG4D-209ENST00000588857 TMEM119Q4V9L6 283 aa24.96■■□□□ 1.59
ATG4D-209ENST00000588857 HYIQ5T013 277 aa24.96■■□□□ 1.59
ATG4D-209ENST00000588857 CTU1Q7Z7A3 348 aaKnown RBP24.96■■□□□ 1.59
ATG4D-209ENST00000588857 FGD4Q96M96 766 aa24.96■■□□□ 1.59
ATG4D-209ENST00000588857 ASB14A6NK59 587 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 SPATA31C2B4DYI2 1134 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 EML1O00423 815 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 ATP9AO75110 1047 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 RPA1P27694 616 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 SMARCE1Q969G3 411 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 EIF2AK1Q9BQI3 630 aaKnown RBP24.95■■□□□ 1.58
ATG4D-209ENST00000588857 POLR3CQ9BUI4 534 aaPredicted RBP24.95■■□□□ 1.58
ATG4D-209ENST00000588857 KIAA1024Q9UPX6 916 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 PCDHA5Q9Y5H7 936 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 DOCK5Q9H7D0 1870 aa24.95■■□□□ 1.58
ATG4D-209ENST00000588857 MED24O75448 989 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 PRR29P0C7W0 189 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 SEMA3FQ13275 785 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 GRB14Q14449 540 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 ZNF792Q3KQV3 632 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 SEPT14Q6ZU15 432 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 DPP9Q86TI2 863 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 CATSPER3Q86XQ3 398 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 STAMQ92783 540 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 ABHD8Q96I13 439 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 KBTBD4Q9NVX7 518 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 TUBE1Q9UJT0 475 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 ZNF236Q9UL36 1845 aa24.94■■□□□ 1.58
ATG4D-209ENST00000588857 POTEB3A0JP26 581 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 SLC15A5A6NIM6 579 aa24.93■■□□□ 1.58
ATG4D-209ENST00000588857 GTPBP6O43824 516 aaPredicted RBP24.93■■□□□ 1.58
ATG4D-209ENST00000588857 ICAM3P32942 547 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms