RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 IPO5O00410 1097 aaKnown RBP21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 TRAPPC10P48553 1259 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 NKX3-2P78367 333 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 FSCN1Q16658 493 aaKnown RBP21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 TTC38Q5R3I4 469 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 METTL7BQ6UX53 244 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 BRAPQ7Z569 592 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 RNF180Q86T96 592 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 KLHDC9Q8NEP7 349 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 AFG1LQ8WV93 481 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 GJA10Q969M2 543 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 TELO2Q9Y4R8 837 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 NFASCO94856 1347 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 CST5P28325 142 aaPredicted RBP21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 MNX1P50219 401 aaPredicted RBP21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 LAMC2Q13753 1193 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 HSDL1Q3SXM5 330 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 ARRDC4Q8NCT1 418 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 GIMAP8Q8ND71 665 aaPredicted RBP21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 ETNPPLQ8TBG4 499 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 SPATA33Q96N06 139 aa21.5■■□□□ 1.03
CLPTM1-209ENST00000588855 DDX39AO00148 427 aaKnown RBP21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 DHX15O43143 795 aaKnown RBP21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 NEMFO60524 1076 aa21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 MCM7P33993 719 aa21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 SP4Q02446 784 aa21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 ZNF174Q15697 407 aa21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 GNASQ5JWF2 1037 aa21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 FOXD4L5Q5VV16 416 aaPredicted RBP21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 CCSAPQ6IQ19 270 aaPredicted RBP21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 FOXD4L4Q8WXT5 416 aaPredicted RBP21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 SDF4Q9BRK5 362 aa21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 KCNMB3Q9NPA1 279 aa21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 PCDHB6Q9Y5E3 794 aa21.49■■□□□ 1.03
CLPTM1-209ENST00000588855 A6NJR5 290 aa21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 DNM1LO00429 736 aa21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 MMP3P08254 477 aa21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 ZSCAN22P10073 491 aaPredicted RBP21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 CPT1AP50416 773 aa21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 RILPL1Q5EBL4 403 aa21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 PPTC7Q8NI37 304 aa21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 DIS3LQ8TF46 1054 aaKnown RBP21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 SLC5A5Q92911 643 aa21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 JPH1Q9HDC5 661 aaPredicted RBP21.48■■□□□ 1.03
CLPTM1-209ENST00000588855 KBTBD13C9JR72 458 aa21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 PDIA4P13667 645 aaKnown RBP21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 KCNA10Q16322 511 aa21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 FAM173BQ6P4H8 233 aa21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 ANKLE1Q8NAG6 615 aa21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 HAS1Q92839 578 aa21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 TMEM60Q9H2L4 133 aa21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 TBC1D22BQ9NU19 505 aa21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 SLC9A2Q9UBY0 812 aa21.47■■□□□ 1.03
CLPTM1-209ENST00000588855 NOP56O00567 594 aaKnown RBP21.46■■□□□ 1.03
CLPTM1-209ENST00000588855 LRCH2Q5VUJ6 765 aa21.46■■□□□ 1.03
CLPTM1-209ENST00000588855 GPR20Q99678 358 aa21.46■■□□□ 1.03
CLPTM1-209ENST00000588855 ZSCAN16Q9H4T2 348 aaPredicted RBP21.46■■□□□ 1.03
CLPTM1-209ENST00000588855 DAXXQ9UER7 740 aaPredicted RBP21.46■■□□□ 1.03
CLPTM1-209ENST00000588855 WDR81Q562E7 1941 aa21.46■■□□□ 1.03
CLPTM1-209ENST00000588855 TBX3O15119 743 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 GAS7O60861 476 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 PSMD10O75832 226 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 CCNE2O96020 404 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 F13A1P00488 732 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 ASGR1P07306 291 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 CAPN2P17655 700 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 ORC2Q13416 577 aaPredicted RBP21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 CALCRLQ16602 461 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 BRDTQ58F21 947 aaPredicted RBP21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 PCSK9Q8NBP7 692 aaKnown RBP21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 RIT2Q99578 217 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 TSEN34Q9BSV6 310 aaKnown RBP21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 MYL3P08590 195 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 HOXD8P13378 290 aaPredicted RBP21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 DDIT3P35638 169 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 ACLYP53396 1101 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 FAM20AQ96MK3 541 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 MTMR9Q96QG7 549 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 TEKT3Q9BXF9 490 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 ZDHHC9Q9Y397 364 aa21.45■■□□□ 1.02
CLPTM1-209ENST00000588855 MOXD2PA6NHM9 499 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 ZEB2O60315 1214 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 MARCH6O60337 910 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 BRD1O95696 1058 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 ACTR2P61160 394 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 DGKDQ16760 1214 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 CXCL17Q6UXB2 119 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 FERMT2Q96AC1 680 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 PAWRQ96IZ0 340 aaKnown RBP21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 PHF24Q9UPV7 400 aa21.44■■□□□ 1.02
CLPTM1-209ENST00000588855 SCN10AQ9Y5Y9 1956 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 ELP1O95163 1332 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 A0A1W2PQ45 241 aaPredicted RBP21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 GSTTP1A0A1W2PQM5 241 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 A0A1W2PQY0 241 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 ZNF286BP0CG31 522 aa21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 TCF7P36402 384 aaPredicted RBP21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 PURAQ00577 322 aaKnown RBP21.43■■□□□ 1.02
CLPTM1-209ENST00000588855 KRT76Q01546 638 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms