RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 FBXO18Q8NFZ0 1043 aa22.88■■□□□ 1.25
ATG4D-208ENST00000588667 HTATIP2Q9BUP3 242 aa22.88■■□□□ 1.25
ATG4D-208ENST00000588667 KCNH7Q9NS40 1196 aa22.88■■□□□ 1.25
ATG4D-208ENST00000588667 A0A1W2PQ45 241 aaPredicted RBP22.87■■□□□ 1.25
ATG4D-208ENST00000588667 A0A1W2PQY0 241 aa22.87■■□□□ 1.25
ATG4D-208ENST00000588667 FAM86B1E9PN63 330 aa22.87■■□□□ 1.25
ATG4D-208ENST00000588667 FAM86B2P0C5J1 330 aa22.87■■□□□ 1.25
ATG4D-208ENST00000588667 SAFBQ15424 915 aaKnown RBP eCLIP22.87■■□□□ 1.25
ATG4D-208ENST00000588667 METTL7BQ6UX53 244 aa22.87■■□□□ 1.25
ATG4D-208ENST00000588667 PPTC7Q8NI37 304 aa22.87■■□□□ 1.25
ATG4D-208ENST00000588667 AFG1LQ8WV93 481 aa22.87■■□□□ 1.25
ATG4D-208ENST00000588667 TNFRSF25Q93038 417 aa22.87■■□□□ 1.25
ATG4D-208ENST00000588667 FERMT2Q96AC1 680 aa22.87■■□□□ 1.25
ATG4D-208ENST00000588667 SCN10AQ9Y5Y9 1956 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 IGLV3-22A0A075B6J6 115 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 KCNA2P16389 499 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 PTMSP20962 102 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 SETQ01105 290 aaPredicted RBP22.86■■□□□ 1.25
ATG4D-208ENST00000588667 GUCY1B3Q02153 619 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 NR5A1Q13285 461 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 GLT1D1Q96MS3 346 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 MLXIPQ9HAP2 919 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 POLR3EQ9NVU0 708 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 TNRC18O15417 2968 aaPredicted RBP22.86■■□□□ 1.25
ATG4D-208ENST00000588667 BTBD18B2RXH4 712 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 CABYRO75952 493 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 MMP3P08254 477 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 INF2Q27J81 1249 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 PIK3AP1Q6ZUJ8 805 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 PLA2G4DQ86XP0 818 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 SPATA33Q96N06 139 aa22.86■■□□□ 1.25
ATG4D-208ENST00000588667 EDIL3O43854 480 aa22.85■■□□□ 1.25
ATG4D-208ENST00000588667 KPNA6O60684 536 aa22.85■■□□□ 1.25
ATG4D-208ENST00000588667 ATP9AO75110 1047 aa22.85■■□□□ 1.25
ATG4D-208ENST00000588667 MOXD1Q6UVY6 613 aa22.85■■□□□ 1.25
ATG4D-208ENST00000588667 CXCL17Q6UXB2 119 aa22.85■■□□□ 1.25
ATG4D-208ENST00000588667 CYFIP1Q7L576 1253 aa22.85■■□□□ 1.25
ATG4D-208ENST00000588667 AGO4Q9HCK5 861 aaKnown RBP22.85■■□□□ 1.25
ATG4D-208ENST00000588667 STARD7Q9NQZ5 370 aa22.85■■□□□ 1.25
ATG4D-208ENST00000588667 ELP1O95163 1332 aa22.85■■□□□ 1.25
ATG4D-208ENST00000588667 CEP290O15078 2479 aa22.84■■□□□ 1.25
ATG4D-208ENST00000588667 SORBS3O60504 671 aa22.84■■□□□ 1.25
ATG4D-208ENST00000588667 ARP10275 920 aa22.84■■□□□ 1.25
ATG4D-208ENST00000588667 PURAQ00577 322 aaKnown RBP22.84■■□□□ 1.25
ATG4D-208ENST00000588667 HSDL1Q3SXM5 330 aa22.84■■□□□ 1.25
ATG4D-208ENST00000588667 PRR16Q569H4 304 aa22.84■■□□□ 1.25
ATG4D-208ENST00000588667 BCAS3Q9H6U6 928 aa22.84■■□□□ 1.25
ATG4D-208ENST00000588667 MYL3P08590 195 aa22.83■■□□□ 1.25
ATG4D-208ENST00000588667 HOXD8P13378 290 aaPredicted RBP22.83■■□□□ 1.25
ATG4D-208ENST00000588667 SNX17Q15036 470 aa22.83■■□□□ 1.25
ATG4D-208ENST00000588667 DGKDQ16760 1214 aa22.83■■□□□ 1.25
ATG4D-208ENST00000588667 EARS2Q5JPH6 523 aaKnown RBP22.83■■□□□ 1.25
ATG4D-208ENST00000588667 NEK8Q86SG6 692 aa22.83■■□□□ 1.25
ATG4D-208ENST00000588667 LENG9Q96B70 501 aa22.83■■□□□ 1.25
ATG4D-208ENST00000588667 PKD2L1Q9P0L9 805 aa22.83■■□□□ 1.25
ATG4D-208ENST00000588667 NFASCO94856 1347 aa22.83■■□□□ 1.25
ATG4D-208ENST00000588667 CYP3A7-CYP3A51PA0A087WV96 503 aa22.82■■□□□ 1.24
ATG4D-208ENST00000588667 NOP56O00567 594 aaKnown RBP22.82■■□□□ 1.24
ATG4D-208ENST00000588667 CYP3A7P24462 503 aa22.82■■□□□ 1.24
ATG4D-208ENST00000588667 ATN1P54259 1190 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-208ENST00000588667 C1orf53Q5VUE5 145 aa22.82■■□□□ 1.24
ATG4D-208ENST00000588667 SLC39A5Q6ZMH5 540 aa22.82■■□□□ 1.24
ATG4D-208ENST00000588667 MTG1Q9BT17 334 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-208ENST00000588667 FOXP1Q9H334 677 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-208ENST00000588667 ZSCAN16Q9H4T2 348 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-208ENST00000588667 LRRC26Q2I0M4 334 aa22.82■■□□□ 1.24
ATG4D-208ENST00000588667 MCTP1Q6DN14 999 aa22.82■■□□□ 1.24
ATG4D-208ENST00000588667 SDF4Q9BRK5 362 aa22.82■■□□□ 1.24
ATG4D-208ENST00000588667 JPH1Q9HDC5 661 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-208ENST00000588667 A0A0U1RQG5 324 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-208ENST00000588667 FAM205CA6NFA0 338 aa22.81■■□□□ 1.24
ATG4D-208ENST00000588667 IPO5O00410 1097 aaKnown RBP22.81■■□□□ 1.24
ATG4D-208ENST00000588667 PPFIA4O75335 1185 aa22.81■■□□□ 1.24
ATG4D-208ENST00000588667 TDP2O95551 362 aa22.81■■□□□ 1.24
ATG4D-208ENST00000588667 GCFC2P16383 781 aaKnown RBP22.81■■□□□ 1.24
ATG4D-208ENST00000588667 ITGB3BPQ13352 177 aaPredicted RBP22.81■■□□□ 1.24
ATG4D-208ENST00000588667 LETM2Q2VYF4 491 aa22.81■■□□□ 1.24
ATG4D-208ENST00000588667 Q4G0T1 1027 aa22.81■■□□□ 1.24
ATG4D-208ENST00000588667 VTI1AQ96AJ9 217 aa22.81■■□□□ 1.24
ATG4D-208ENST00000588667 MBOAT7Q96N66 472 aa22.81■■□□□ 1.24
ATG4D-208ENST00000588667 NAP1L4Q99733 375 aaKnown RBP22.81■■□□□ 1.24
ATG4D-208ENST00000588667 GNL2Q13823 731 aaKnown RBP22.8■■□□□ 1.24
ATG4D-208ENST00000588667 PPP4R3AQ6IN85 833 aa22.8■■□□□ 1.24
ATG4D-208ENST00000588667 FERMT3Q86UX7 667 aa22.8■■□□□ 1.24
ATG4D-208ENST00000588667 GPR20Q99678 358 aa22.8■■□□□ 1.24
ATG4D-208ENST00000588667 ZNF577Q9BSK1 485 aa22.8■■□□□ 1.24
ATG4D-208ENST00000588667 ANP32EQ9BTT0 268 aa22.8■■□□□ 1.24
ATG4D-208ENST00000588667 SP4Q02446 784 aa22.79■■□□□ 1.24
ATG4D-208ENST00000588667 SLC9A2Q9UBY0 812 aa22.79■■□□□ 1.24
ATG4D-208ENST00000588667 DDX25Q9UHL0 483 aaKnown RBP22.79■■□□□ 1.24
ATG4D-208ENST00000588667 RTP1P59025 263 aa22.79■■□□□ 1.24
ATG4D-208ENST00000588667 FOXD4L6Q3SYB3 417 aaPredicted RBP22.79■■□□□ 1.24
ATG4D-208ENST00000588667 FOXD4L3Q6VB84 417 aaPredicted RBP22.79■■□□□ 1.24
ATG4D-208ENST00000588667 NOSTRINQ8IVI9 506 aa22.79■■□□□ 1.24
ATG4D-208ENST00000588667 DPF3Q92784 378 aa22.79■■□□□ 1.24
ATG4D-208ENST00000588667 SEZ6LQ9BYH1 1024 aa22.79■■□□□ 1.24
ATG4D-208ENST00000588667 TBC1D22BQ9NU19 505 aa22.79■■□□□ 1.24
ATG4D-208ENST00000588667 MSH4O15457 936 aa22.78■■□□□ 1.24
ATG4D-208ENST00000588667 EVI5O60447 810 aa22.78■■□□□ 1.24
ATG4D-208ENST00000588667 CCNT1O60563 726 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms