RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 LGALS2P05162 132 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 SMIM10L2AP0DMW4 78 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 SMIM10L2BP0DMW5 78 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 THPOP40225 353 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 MRPS9P82933 396 aaKnown RBP16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 EPC2Q52LR7 807 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 KCNV1Q6PIU1 500 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 CHD1LQ86WJ1 897 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 MYOCDQ8IZQ8 938 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 SAMD3Q8N6K7 520 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 MRPL38Q96DV4 380 aaKnown RBP16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 INPP4AQ96PE3 977 aaPredicted RBP16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 RIOX1Q9H6W3 641 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 RC3H2Q9HBD1 1191 aaKnown RBP16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 HCN4Q9Y3Q4 1203 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 TAF6LQ9Y6J9 622 aa16.04■□□□□ 0.16
CLPTM1-208ENST00000588274 GRXCR2A6NFK2 248 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 AMHP03971 560 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 TGFB3P10600 412 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 GRM4Q14833 912 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 IMMTQ16891 758 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 IFIT1BQ5T764 474 aaKnown RBP16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 TRIM50Q86XT4 487 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 GJD3Q8N144 294 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 TOP1MTQ969P6 601 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 PIGSQ96S52 555 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 KRT23Q9C075 422 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 RNPEPQ9H4A4 650 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 DIAPH3Q9NSV4 1193 aa16.03■□□□□ 0.16
CLPTM1-208ENST00000588274 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 H3BNC9 293 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 H3BRB1 525 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 CAND2O75155 1236 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 ICAM3P32942 547 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 PTCRAQ6ISU1 281 aaPredicted RBP16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 ATP6V0A1Q93050 837 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 GPR20Q99678 358 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 TUT1Q9H6E5 874 aaKnown RBP16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 CNNM2Q9H8M5 875 aa16.02■□□□□ 0.16
CLPTM1-208ENST00000588274 CTSHP09668 335 aa16.01■□□□□ 0.15
CLPTM1-208ENST00000588274 CCND2P30279 289 aa16.01■□□□□ 0.15
CLPTM1-208ENST00000588274 TROAPQ12815 778 aa16.01■□□□□ 0.15
CLPTM1-208ENST00000588274 B4GALNT3Q6L9W6 998 aa16.01■□□□□ 0.15
CLPTM1-208ENST00000588274 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
CLPTM1-208ENST00000588274 PRR33A8MZF0 331 aa16■□□□□ 0.15
CLPTM1-208ENST00000588274 SPATA31C2B4DYI2 1134 aa16■□□□□ 0.15
CLPTM1-208ENST00000588274 H3BQ06 376 aaPredicted RBP16■□□□□ 0.15
CLPTM1-208ENST00000588274 TCEAL5Q5H9L2 206 aa16■□□□□ 0.15
CLPTM1-208ENST00000588274 FAM26DQ5JW98 314 aa16■□□□□ 0.15
CLPTM1-208ENST00000588274 METTL7BQ6UX53 244 aa16■□□□□ 0.15
CLPTM1-208ENST00000588274 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
CLPTM1-208ENST00000588274 SETD4Q9NVD3 440 aa16■□□□□ 0.15
CLPTM1-208ENST00000588274 SUPT16HQ9Y5B9 1047 aaKnown RBP16■□□□□ 0.15
CLPTM1-208ENST00000588274 BAZ2BQ9UIF8 2168 aaKnown RBP16■□□□□ 0.15
CLPTM1-208ENST00000588274 C5orf67F2Z3F1 127 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 GCOM1H8Y6P7 765 aaPredicted RBP15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 HIP1O00291 1037 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 CYP21A2P08686 494 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 POLR2MP0CAP2 368 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 GSPT1P15170 499 aaKnown RBP15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 LTBRP36941 435 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 ZP2Q05996 745 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 TIGD5Q53EQ6 642 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 TMEM192Q8IY95 271 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 BANK1Q8NDB2 785 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 SEPT8Q92599 483 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 PABPC5Q96DU9 382 aaKnown RBP15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 SAMD11Q96NU1 681 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 MLXIPQ9HAP2 919 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 CTNNA3Q9UI47 895 aa15.99■□□□□ 0.15
CLPTM1-208ENST00000588274 POTEB3A0JP26 581 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 C19orf67A6NJJ6 358 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 ANTXR2P58335 489 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 MGAT3Q09327 533 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 CTC1Q2NKJ3 1217 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 POTEBQ6S5H4 581 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 YME1L1Q96TA2 773 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 USP26Q9BXU7 913 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 EHMT1Q9H9B1 1298 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 ZNF318Q5VUA4 2279 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 MYO7AQ13402 2215 aa15.98■□□□□ 0.15
CLPTM1-208ENST00000588274 PNMA6FA0A0J9YX94 578 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 FIBPO43427 364 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 CHRNA1P02708 482 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 GPM6BQ13491 265 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 AAMPQ13685 434 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 PTPROQ16827 1216 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 RUFY4Q6ZNE9 571 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 CYFIP1Q7L576 1253 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 RPAINQ86UA6 219 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 CRIPAKQ8N1N5 446 aa15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 IFIH1Q9BYX4 1025 aaKnown RBP15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 NSUN3Q9H649 340 aaKnown RBP15.97■□□□□ 0.15
CLPTM1-208ENST00000588274 KIAA1671Q9BY89 1806 aa15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 MEIS2O14770 477 aa15.96■□□□□ 0.15
CLPTM1-208ENST00000588274 STAM2O75886 525 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms