RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 NACC1Q96RE7 527 aa4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 UHRF1Q96T88 793 aaPredicted RBP4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 FAM126AQ9BYI3 521 aaPredicted RBP4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 MKRN2Q9H000 416 aaKnown RBP4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 KCNH6Q9H252 994 aa4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 SLKQ9H2G2 1235 aaPredicted RBP4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 LGR6Q9HBX8 967 aa4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 NCOA5Q9HCD5 579 aaKnown RBP4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 SSU72Q9NP77 194 aaKnown RBP4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 MYO15AQ9UKN7 3530 aa4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 CEP131Q9UPN4 1083 aa4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 NOP58Q9Y2X3 529 aaKnown RBP4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 BCORQ6W2J9 1755 aa4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 FANCIQ9NVI1 1328 aa4.42□□□□□ -1.7
LDLRAD4-209ENST00000587440 ASH1LQ9NR48 2969 aaKnown RBP4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 RAB11FIP3O75154 756 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 EOMESO95936 686 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 ITGB2P05107 769 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 POU3F3P20264 500 aaPredicted RBP4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 CD247P20963 164 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 NHLH1Q02575 133 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 CDK5R2Q13319 367 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 AUHQ13825 339 aaKnown RBP4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 TM4SF20Q53R12 229 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 FAM214BQ7L5A3 538 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 ARHGEF25Q86VW2 580 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 THNSL2Q86YJ6 484 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 C7orf61Q8IZ16 206 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 TDHQ8IZJ6 230 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 LRRN4CLQ8ND94 238 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 ADCY4Q8NFM4 1077 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 ATXN2LQ8WWM7 1075 aaKnown RBP4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 UTP4Q969X6 686 aaKnown RBP4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 MRGPRX3Q96LB0 322 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 CLUHP3Q96NS8 147 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 APBA2Q99767 749 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 GDF15Q99988 308 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 AARSD1Q9BTE6 412 aaKnown RBP4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 GP6Q9HCN6 339 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 WHRNQ9P202 907 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 PLAAQ9Y263 795 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 MRPS23Q9Y3D9 190 aaKnown RBP4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 ZNF541Q9H0D2 1346 aa4.41□□□□□ -1.7
LDLRAD4-209ENST00000587440 MAP2P11137 1827 aaKnown RBP4.4□□□□□ -1.7
LDLRAD4-209ENST00000587440 FLNBO75369 2602 aaKnown RBP4.4□□□□□ -1.7
LDLRAD4-209ENST00000587440 A0A087X0B3 334 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 TRAV20A0A0B4J274 112 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 AGRPO00253 132 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 IRS4O14654 1257 aaPredicted RBP4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 GAS2O43903 313 aaKnown RBP4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 C6orf222P0C671 652 aaPredicted RBP4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 BMP3P12645 472 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 MAP4P27816 1152 aaKnown RBP4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 ZNF445P59923 1031 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 IGBP1P78318 339 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 PABPC4Q13310 644 aaKnown RBP eCLIP4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 ZC3H12BQ5HYM0 836 aaKnown RBP4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 ERICH6BQ5W0A0 696 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 OTOP1Q7RTM1 612 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 NBPF11Q86T75 865 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 BVESQ8NE79 360 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 ZCRB1Q8TBF4 217 aaKnown RBP4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 RNF141Q8WVD5 230 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 STAG1Q8WVM7 1258 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 NINJ1Q92982 152 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 OSBP2Q969R2 916 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 FBXL18Q96ME1 805 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 PRAM1Q96QH2 718 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 DHRS4Q9BTZ2 278 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 DUSP23Q9BVJ7 150 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 CGGBP1Q9UFW8 167 aaPredicted RBP4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 STAP2Q9UGK3 403 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 PTPN22Q9Y2R2 807 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 EMC9Q9Y3B6 208 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 TRIM17Q9Y577 477 aa4.4□□□□□ -1.71
LDLRAD4-209ENST00000587440 PIK3C2GO75747 1445 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 COL2A1P02458 1487 aaPredicted RBP4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 TRBV23-1A0A0A0MS06 115 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 C1QTNF9BB2RNN3 333 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 CCER2I3L3R5 266 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 SART1O43290 800 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 LRRN2O75325 713 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 LEFTY1O75610 366 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 RFPL3O75679 317 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 NAT2P11245 290 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 FGFR1P11362 822 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 PABPC1P11940 636 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 USP11P51784 963 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 RNF4P78317 190 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 CYP4F3Q08477 520 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 HSP90AA2PQ14568 343 aaPredicted RBP4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 SF1Q15637 639 aaKnown RBP4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 SLC4A8Q2Y0W8 1093 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 NBPF9Q3BBW0 867 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 TMEM132EQ6IEE7 984 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 GPAT2Q6NUI2 795 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 KRT26Q7Z3Y9 468 aa4.39□□□□□ -1.71
LDLRAD4-209ENST00000587440 ADAT2Q7Z6V5 191 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms