RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 C5orf60A6NFR6 353 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 NAPAP54920 295 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 ERVK-9P63128 1117 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 RPS6KA1Q15418 735 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 SNCBQ16143 134 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 KIAA0753Q2KHM9 967 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 C10orf76Q5T2E6 689 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 KLHL7Q8IXQ5 586 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 CDK5RAP3Q96JB5 506 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 FAM84BQ96KN1 310 aaPredicted RBP18.08■□□□□ 0.49
RANBP3-209ENST00000587411 KIAA1551Q9HCM1 1747 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 SCN7AQ01118 1682 aa18.08■□□□□ 0.49
RANBP3-209ENST00000587411 PALM3A6NDB9 673 aaPredicted RBP18.08■□□□□ 0.48
RANBP3-209ENST00000587411 NOL4O94818 638 aa18.08■□□□□ 0.48
RANBP3-209ENST00000587411 ECHS1P30084 290 aa18.08■□□□□ 0.48
RANBP3-209ENST00000587411 CTNNA1P35221 906 aaKnown RBP18.08■□□□□ 0.48
RANBP3-209ENST00000587411 FKBP3Q00688 224 aaKnown RBP18.08■□□□□ 0.48
RANBP3-209ENST00000587411 IFI16Q16666 785 aaKnown RBP18.08■□□□□ 0.48
RANBP3-209ENST00000587411 TBC1D5Q92609 795 aa18.08■□□□□ 0.48
RANBP3-209ENST00000587411 CENPHQ9H3R5 247 aa18.08■□□□□ 0.48
RANBP3-209ENST00000587411 LAMB2P55268 1798 aa18.08■□□□□ 0.48
RANBP3-209ENST00000587411 BHMG1C9JSJ3 638 aaPredicted RBP18.07■□□□□ 0.48
RANBP3-209ENST00000587411 ZNF844Q08AG5 666 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 TRADDQ15628 312 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 ACTRT1Q8TDG2 376 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 SCFD2Q8WU76 684 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 LSM14BQ9BX40 385 aaKnown RBP18.07■□□□□ 0.48
RANBP3-209ENST00000587411 SPZ1Q9BXG8 430 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 GNA14O95837 355 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 NF2P35240 595 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 FXR2P51116 673 aaKnown RBP eCLIP18.07■□□□□ 0.48
RANBP3-209ENST00000587411 PPP2R2AP63151 447 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 LACTB2Q53H82 288 aaPredicted RBP18.07■□□□□ 0.48
RANBP3-209ENST00000587411 PARP9Q8IXQ6 854 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 CEP63Q96MT8 703 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 AIPL1Q9NZN9 384 aa18.07■□□□□ 0.48
RANBP3-209ENST00000587411 ZPR1O75312 459 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 POLR2FP61218 127 aaKnown RBP18.06■□□□□ 0.48
RANBP3-209ENST00000587411 IFFO1Q0D2I5 559 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 UAP1Q16222 522 aaPredicted RBP18.06■□□□□ 0.48
RANBP3-209ENST00000587411 TMEM266Q2M3C6 531 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 ANKRD20A8PQ5CZ79 823 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 DYMQ7RTS9 669 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 MYOCDQ8IZQ8 938 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 CACNA2D3Q8IZS8 1091 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 SGSM3Q96HU1 749 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 PNMA5Q96PV4 448 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 BSDC1Q9NW68 430 aaPredicted RBP18.06■□□□□ 0.48
RANBP3-209ENST00000587411 KCNK3O14649 394 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 ELF1P32519 619 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 USP11P51784 963 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 KLHL30Q0D2K2 578 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 ZCWPW2Q504Y3 356 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 CYB5D1Q6P9G0 228 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 FBXO33Q7Z6M2 555 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 RAD54LQ92698 747 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.06■□□□□ 0.48
RANBP3-209ENST00000587411 RAB34Q9BZG1 259 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 PACSIN2Q9UNF0 486 aaPredicted RBP18.06■□□□□ 0.48
RANBP3-209ENST00000587411 A0A087X0T9 212 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 SMCO2A6NFE2 343 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 KIF4AO95239 1232 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 FAM228BP0C875 321 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 PSEN1P49768 467 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 SEPT2Q15019 361 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 ASIC2Q16515 512 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 FUKQ8N0W3 1084 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 SEC16BQ96JE7 1060 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 OSBPL7Q9BZF2 842 aa18.06■□□□□ 0.48
RANBP3-209ENST00000587411 CCDC188H7C350 402 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 CAMTA2O94983 1202 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 TXKP42681 527 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 RNASE9P60153 205 aaKnown RBP18.05■□□□□ 0.48
RANBP3-209ENST00000587411 ODF2Q5BJF6 829 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 HOMEZQ8IX15 550 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 TBCKQ8TEA7 893 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 MTMR9Q96QG7 549 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 SUFUQ9UMX1 484 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 NIP7Q9Y221 180 aaKnown RBP eCLIP18.05■□□□□ 0.48
RANBP3-209ENST00000587411 ROBO3Q96MS0 1386 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 RAPGEF1Q13905 1077 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 SWAP70Q9UH65 585 aa18.05■□□□□ 0.48
RANBP3-209ENST00000587411 PHLPP1O60346 1717 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 PGRMC1O00264 195 aaKnown RBP18.04■□□□□ 0.48
RANBP3-209ENST00000587411 GHRP10912 638 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 MARSP56192 900 aaKnown RBP18.04■□□□□ 0.48
RANBP3-209ENST00000587411 CALCRLQ16602 461 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 GKAP1Q5VSY0 366 aaPredicted RBP18.04■□□□□ 0.48
RANBP3-209ENST00000587411 BRINP3Q76B58 766 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 DDX12PQ92771 950 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 MKNK2Q9HBH9 465 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 ADAMTS1Q9UHI8 967 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 ODF2LQ9ULJ1 636 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 LEMD3Q9Y2U8 911 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 KLRF2D3W0D1 207 aa18.04■□□□□ 0.48
RANBP3-209ENST00000587411 TRAF5O00463 557 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms