RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 GRM6O15303 877 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 LINC01565O15544 149 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 NDUFV1P49821 464 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 TCF15Q12870 199 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 AAMPQ13685 434 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 HSDL1Q3SXM5 330 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
SDF2-204ENST00000587338 BMP8AQ7Z5Y6 402 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 MCF2L2Q86YR7 1114 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 IL17RAQ96F46 866 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 OSBPL7Q9BZF2 842 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 KIAA1217Q5T5P2 1943 aa9.99□□□□□ -0.81
SDF2-204ENST00000587338 RALGAPA2Q2PPJ7 1873 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 ATG2AQ2TAZ0 1938 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 C5orf67F2Z3F1 127 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 TREHO43280 583 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 DHX16O60231 1041 aaKnown RBP9.98□□□□□ -0.81
SDF2-204ENST00000587338 PPFIA4O75335 1185 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 GGPS1O95749 300 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 NR3C2P08235 984 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 FGRP09769 529 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 SMIM10L2AP0DMW4 78 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 SMIM10L2BP0DMW5 78 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 SNHG28P0DPA3 235 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 HOXD8P13378 290 aaPredicted RBP9.98□□□□□ -0.81
SDF2-204ENST00000587338 PKN1Q16512 942 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 PI4K2BQ8TCG2 481 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 LMAN2LQ9H0V9 348 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 PXMP2Q9NR77 195 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 TCP11L1Q9NUJ3 509 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 TTC41PQ6P2S7 1318 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 ADGRA3Q8IWK6 1321 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 MYO15AQ9UKN7 3530 aa9.98□□□□□ -0.81
SDF2-204ENST00000587338 CAND2O75155 1236 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 RGS20O76081 388 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 CFBP00751 764 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 RB1P06400 928 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 MYCLP12524 364 aaPredicted RBP9.97□□□□□ -0.81
SDF2-204ENST00000587338 UBA1P22314 1058 aaKnown RBP9.97□□□□□ -0.81
SDF2-204ENST00000587338 BMPR1AP36894 532 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 HAND2P61296 217 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 ZXDAP98168 799 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 CELF3Q5SZQ8 465 aaKnown RBP9.97□□□□□ -0.81
SDF2-204ENST00000587338 MYSM1Q5VVJ2 828 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 OTUD7AQ8TE49 926 aaPredicted RBP9.97□□□□□ -0.81
SDF2-204ENST00000587338 APBB2Q92870 758 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 C16orf70Q9BSU1 422 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 MAF1Q9H063 256 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 DCTPP1Q9H773 170 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 RWDD3Q9Y3V2 267 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 FAM186AA6NE01 2351 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
SDF2-204ENST00000587338 H3BRB1 525 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 MMP1P03956 469 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 LGALS2P05162 132 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 LINC00271P0C7V0 271 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 HSPD1P10809 573 aaKnown RBP9.96□□□□□ -0.82
SDF2-204ENST00000587338 VCPP55072 806 aaKnown RBP9.96□□□□□ -0.82
SDF2-204ENST00000587338 ADAM15Q13444 863 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 BTG3Q14201 252 aaPredicted RBP9.96□□□□□ -0.82
SDF2-204ENST00000587338 ALX1Q15699 326 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 QRICH1Q2TAL8 776 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 ADGRF4Q8IZF3 695 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 ATOH1Q92858 354 aaPredicted RBP9.96□□□□□ -0.82
SDF2-204ENST00000587338 PPP2R3CQ969Q6 453 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 TTC14Q96N46 770 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 ZKSCAN3Q9BRR0 538 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 RWDD1Q9H446 243 aaPredicted RBP9.96□□□□□ -0.82
SDF2-204ENST00000587338 TUT1Q9H6E5 874 aaKnown RBP9.96□□□□□ -0.82
SDF2-204ENST00000587338 MLXIPQ9HAP2 919 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 ALG13Q9NP73 1137 aaKnown RBP9.96□□□□□ -0.82
SDF2-204ENST00000587338 MRPL11Q9Y3B7 192 aaKnown RBP9.96□□□□□ -0.82
SDF2-204ENST00000587338 GVINP1Q7Z2Y8 2422 aa9.96□□□□□ -0.82
SDF2-204ENST00000587338 MYH7BA7E2Y1 1941 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 LOC730098B7Z3J9 87 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 NOP56O00567 594 aaKnown RBP9.95□□□□□ -0.82
SDF2-204ENST00000587338 EYA4O95677 639 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 FGAP02671 866 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 GHRP10912 638 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 HOXC8P31273 242 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 FOXK2Q01167 660 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 SP2Q02086 613 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 SIGLEC14Q08ET2 396 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 KCNV1Q6PIU1 500 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 MFSD6Q6ZSS7 791 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 ADGRD2Q7Z7M1 963 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 TBC1D10CQ8IV04 446 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 SMRP1Q8NCR6 262 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 PNMA1Q8ND90 353 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 IL31RAQ8NI17 732 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 GPKOWQ92917 476 aaPredicted RBP eCLIP9.95□□□□□ -0.82
SDF2-204ENST00000587338 CLP1Q92989 425 aaKnown RBP9.95□□□□□ -0.82
SDF2-204ENST00000587338 ZFP91Q96JP5 570 aaPredicted RBP9.95□□□□□ -0.82
SDF2-204ENST00000587338 MSLNLQ96KJ4 702 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 PDCD2LQ9BRP1 358 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 RNPEPQ9H4A4 650 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 VAT1LQ9HCJ6 419 aa9.95□□□□□ -0.82
SDF2-204ENST00000587338 SETD4Q9NVD3 440 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms