RNA–Protein interactions for RNA: ENST00000587169.5

CIRBP-212, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-212ENST00000587169 USP21Q9UK80 565 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 MYH1P12882 1939 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 SHTN1A0MZ66 631 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 FGFR1OPO95684 399 aaKnown RBP18.57■□□□□ 0.56
CIRBP-212ENST00000587169 PDHBP11177 359 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 SLC16A2P36021 539 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 FXR2P51116 673 aaKnown RBP eCLIP18.57■□□□□ 0.56
CIRBP-212ENST00000587169 ADCY7P51828 1080 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 C16orf86Q6ZW13 317 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 IFT20Q8IY31 132 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 PIK3R5Q8WYR1 880 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 CAVIN3Q969G5 261 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 CENPHQ9H3R5 247 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 PANK4Q9NVE7 773 aa18.57■□□□□ 0.56
CIRBP-212ENST00000587169 RAD21O60216 631 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 ALS2CLQ60I27 953 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 ICE2Q659A1 982 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 TTBK2Q6IQ55 1244 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 TPTE2Q6XPS3 522 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 ERLIN2O94905 339 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 SEC24CP53992 1094 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 PPP4CP60510 307 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 FKBP3Q00688 224 aaKnown RBP18.56■□□□□ 0.56
CIRBP-212ENST00000587169 PICALMQ13492 652 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 FAM26FQ5R3K3 315 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 MEX3CQ5U5Q3 659 aaKnown RBP18.56■□□□□ 0.56
CIRBP-212ENST00000587169 IQCKQ8N0W5 287 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 HAS1Q92839 578 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 FAM107BQ9H098 131 aa18.56■□□□□ 0.56
CIRBP-212ENST00000587169 SSU72P8A0A1W2PR75 194 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 RAD51CO43502 376 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 GTF2A1P52655 376 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-212ENST00000587169 ZCWPW2Q504Y3 356 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 DDX42Q86XP3 938 aaKnown RBP eCLIP18.55■□□□□ 0.562e-6■■■□□ 17.9
CIRBP-212ENST00000587169 GDF3Q9NR23 364 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 LAMB2P55268 1798 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 PPP1R11O60927 126 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-212ENST00000587169 SERPING1P05155 500 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 NAB2Q15742 525 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 OR2W6PQ8NHA6 318 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 IQCDQ96DY2 449 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 CEP72Q9P209 647 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 ATP6V0A2Q9Y487 856 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.55■□□□□ 0.56
CIRBP-212ENST00000587169 RREB1Q92766 1687 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 COL16A1Q07092 1604 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-212ENST00000587169 RFC4P35249 363 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 KLHL30Q0D2K2 578 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 KIAA1024Q9UPX6 916 aa18.55■□□□□ 0.56
CIRBP-212ENST00000587169 GRID2IPA4D2P6 1211 aa18.54■□□□□ 0.56
CIRBP-212ENST00000587169 GSTO1P78417 241 aa18.54■□□□□ 0.56
CIRBP-212ENST00000587169 HERC4Q5GLZ8 1057 aaPredicted RBP18.54■□□□□ 0.56
CIRBP-212ENST00000587169 RNF10Q8N5U6 811 aaKnown RBP18.54■□□□□ 0.56
CIRBP-212ENST00000587169 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
CIRBP-212ENST00000587169 DDX25Q9UHL0 483 aaKnown RBP18.54■□□□□ 0.56
CIRBP-212ENST00000587169 KCNK3O14649 394 aa18.54■□□□□ 0.56
CIRBP-212ENST00000587169 EPB41P11171 864 aaKnown RBP18.54■□□□□ 0.56
CIRBP-212ENST00000587169 TMEM119Q4V9L6 283 aa18.54■□□□□ 0.56
CIRBP-212ENST00000587169 GBP6Q6ZN66 633 aa18.54■□□□□ 0.56
CIRBP-212ENST00000587169 AP1M1Q9BXS5 423 aa18.54■□□□□ 0.56
CIRBP-212ENST00000587169 NARFQ9UHQ1 456 aa18.54■□□□□ 0.56
CIRBP-212ENST00000587169 POTEB3A0JP26 581 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 POTECB2RU33 542 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 HPDP32754 393 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-212ENST00000587169 STAT3P40763 770 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 HLTFQ14527 1009 aaKnown RBP eCLIP18.53■□□□□ 0.56
CIRBP-212ENST00000587169 POTEBQ6S5H4 581 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 MAATS1Q7Z4T9 603 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 IPO4Q8TEX9 1081 aaKnown RBP18.53■□□□□ 0.56
CIRBP-212ENST00000587169 INPP4AQ96PE3 977 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-212ENST00000587169 RIC8AQ9NPQ8 531 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 RTCBQ9Y3I0 505 aaKnown RBP18.53■□□□□ 0.56
CIRBP-212ENST00000587169 PAK2Q13177 524 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 SLC18A3Q16572 532 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 MEI1Q5TIA1 1274 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 BCAS3Q9H6U6 928 aa18.53■□□□□ 0.56
CIRBP-212ENST00000587169 RBAK-RBAKDNI3L0D1 243 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 AKR1B1P15121 316 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 SLC9A1P19634 815 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 SKOR1P84550 965 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 RAB34Q9BZG1 259 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 LDHCP07864 332 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 INPP5BP32019 993 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 SCFD1Q8WVM8 642 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 PCDHA12Q9UN75 941 aa18.52■□□□□ 0.56
CIRBP-212ENST00000587169 LSP1P33241 339 aa18.52■□□□□ 0.55
CIRBP-212ENST00000587169 CASP5P51878 434 aa18.52■□□□□ 0.55
CIRBP-212ENST00000587169 RHBDL3P58872 404 aa18.52■□□□□ 0.55
CIRBP-212ENST00000587169 PTK2Q05397 1052 aa18.52■□□□□ 0.55
CIRBP-212ENST00000587169 ADAM9Q13443 819 aa18.52■□□□□ 0.55
CIRBP-212ENST00000587169 PDIA5Q14554 519 aa18.52■□□□□ 0.55
CIRBP-212ENST00000587169 CEP85LQ5SZL2 805 aa18.52■□□□□ 0.55
CIRBP-212ENST00000587169 DPP8Q6V1X1 898 aaPredicted RBP18.52■□□□□ 0.55
CIRBP-212ENST00000587169 TRIM59Q8IWR1 403 aa18.52■□□□□ 0.55
CIRBP-212ENST00000587169 GPSM2P81274 684 aa18.51■□□□□ 0.55
CIRBP-212ENST00000587169 GPBP1Q86WP2 473 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms