RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FLOT1O75955 427 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
LIG3-203ENST00000585370 VCAM1P19320 739 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 CDC25BP30305 580 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 PPP1R2P41236 205 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 HSD17B4P51659 736 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 MYL5Q02045 173 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 COG2Q14746 738 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 TKFCQ3LXA3 575 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 AOPEPQ8N6M6 819 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 ERMNQ8TAM6 284 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 ENOX1Q8TC92 643 aaKnown RBP11.66□□□□□ -0.54
LIG3-203ENST00000585370 MRFAP1L1Q96HT8 127 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 ASCC2Q9H1I8 757 aaPredicted RBP11.66□□□□□ -0.54
LIG3-203ENST00000585370 RPAP3Q9H6T3 665 aaPredicted RBP11.66□□□□□ -0.54
LIG3-203ENST00000585370 FBXO28Q9NVF7 368 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 HOXC10Q9NYD6 342 aa11.66□□□□□ -0.54
LIG3-203ENST00000585370 ATAD5Q96QE3 1844 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 CFBP00751 764 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 GCLCP48506 637 aaPredicted RBP11.65□□□□□ -0.54
LIG3-203ENST00000585370 HYIQ5T013 277 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 CHRDL2Q6WN34 429 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 SV2BQ7L1I2 683 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 HAS1Q92839 578 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 DEFB118Q96PH6 123 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 C7orf25Q9BPX7 421 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 PAK6Q9NQU5 681 aaPredicted RBP11.65□□□□□ -0.54
LIG3-203ENST00000585370 GJD2Q9UKL4 321 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 ADAMTS5Q9UNA0 930 aa11.65□□□□□ -0.54
LIG3-203ENST00000585370 ZNF536O15090 1300 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.64□□□□□ -0.55
LIG3-203ENST00000585370 VWA5AO00534 786 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 ATP2A1O14983 1001 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 CBFA2T2O43439 604 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 PEX10O60683 326 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 FARP2O94887 1054 aaPredicted RBP11.64□□□□□ -0.55
LIG3-203ENST00000585370 TFRCP02786 760 aaKnown RBP11.64□□□□□ -0.55
LIG3-203ENST00000585370 RPN1P04843 607 aaKnown RBP11.64□□□□□ -0.55
LIG3-203ENST00000585370 PLCG1P19174 1290 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 CDC25AP30304 524 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 DSG3P32926 999 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 ZNF75DP51815 510 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
LIG3-203ENST00000585370 PABPC4Q13310 644 aaKnown RBP eCLIP11.64□□□□□ -0.55
LIG3-203ENST00000585370 NAALADL2Q58DX5 795 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 ZNF658Q5TYW1 1059 aaPredicted RBP11.64□□□□□ -0.55
LIG3-203ENST00000585370 HAUS3Q68CZ6 603 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 XRRA1Q6P2D8 792 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 CNNM4Q6P4Q7 775 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 CATSPERGQ6ZRH7 1159 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 NIPA1Q7RTP0 329 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 FCHSD1Q86WN1 690 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 PLA2G4DQ86XP0 818 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 GRAMD1CQ8IYS0 662 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 ETNPPLQ8TBG4 499 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 P2RX7Q99572 595 aaKnown RBP11.64□□□□□ -0.55
LIG3-203ENST00000585370 MMTAG2Q9BU76 263 aaKnown RBP11.64□□□□□ -0.55
LIG3-203ENST00000585370 HTATIP2Q9BUP3 242 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 CRISPLD2Q9H0B8 497 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 LOC285556D6RIA3 1793 aa11.64□□□□□ -0.55
LIG3-203ENST00000585370 DNAH12Q6ZR08 3092 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 A0A0C4DFX4 3053 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 PVALEFA0A1B0GWK0 134 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 PP2D1A8MPX8 630 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 MUTP22033 750 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 HOXA13P31271 388 aaPredicted RBP11.63□□□□□ -0.55
LIG3-203ENST00000585370 GRB10Q13322 594 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 STIM1Q13586 685 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 NCAPHQ15003 741 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 TMEM119Q4V9L6 283 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 PRR16Q569H4 304 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 ISM2Q6H9L7 571 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 SNX29Q8TEQ0 813 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 CLEC4DQ8WXI8 215 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 AGBL1Q96MI9 1066 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 PRO3102Q9H379 93 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 TXNRD2Q9NNW7 524 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 BMP2KQ9NSY1 1161 aaPredicted RBP11.63□□□□□ -0.55
LIG3-203ENST00000585370 COL6A3P12111 3177 aa11.63□□□□□ -0.55
LIG3-203ENST00000585370 AP5Z1O43299 807 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 RHOBTB3O94955 611 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 ALAS1P13196 640 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 BMP6P22004 513 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 CCT6AP40227 531 aaKnown RBP11.62□□□□□ -0.55
LIG3-203ENST00000585370 TRIM32Q13049 653 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 PSMD2Q13200 908 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 CUL4BQ13620 913 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 SPATA1Q5VX52 437 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 POTEEQ6S8J3 1075 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 SAMD1Q6SPF0 538 aaPredicted RBP11.62□□□□□ -0.55
LIG3-203ENST00000585370 ZSCAN30Q86W11 494 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 DRC7Q8IY82 874 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 CPXCR1Q8N123 301 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 MB21D1Q8N884 522 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 LARP4BQ92615 738 aaKnown RBP11.62□□□□□ -0.55
LIG3-203ENST00000585370 RAD54LQ92698 747 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 MTRQ99707 1265 aa11.62□□□□□ -0.55
LIG3-203ENST00000585370 RAVER2Q9HCJ3 691 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms