RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SENP7Q9BQF6 1050 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 INSL6Q9Y581 213 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 SUPT16HQ9Y5B9 1047 aaKnown RBP17.34■□□□□ 0.37
VAPA-209ENST00000585042 REV3LO60673 3130 aa17.34■□□□□ 0.37
VAPA-209ENST00000585042 PIK3CDO00329 1044 aa17.33■□□□□ 0.36
VAPA-209ENST00000585042 NOP56O00567 594 aaKnown RBP17.33■□□□□ 0.36
VAPA-209ENST00000585042 FIBPO43427 364 aa17.33■□□□□ 0.36
VAPA-209ENST00000585042 GNAQP50148 359 aa17.33■□□□□ 0.36
VAPA-209ENST00000585042 MRPS9P82933 396 aaKnown RBP17.33■□□□□ 0.36
VAPA-209ENST00000585042 MBTPS1Q14703 1052 aa17.33■□□□□ 0.36
VAPA-209ENST00000585042 GIMAP8Q8ND71 665 aaPredicted RBP17.33■□□□□ 0.36
VAPA-209ENST00000585042 ATP6V0A1Q93050 837 aa17.33■□□□□ 0.36
VAPA-209ENST00000585042 RRP36Q96EU6 259 aaKnown RBP17.33■□□□□ 0.36
VAPA-209ENST00000585042 SENP2Q9HC62 589 aa17.33■□□□□ 0.36
VAPA-209ENST00000585042 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.36
VAPA-209ENST00000585042 PTPRSQ13332 1948 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 DDAH1O94760 285 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 AMHP03971 560 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 LGALS2P05162 132 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 THPOP40225 353 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 TFF2Q03403 129 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 HIC1Q14526 733 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 PLEKHG4Q58EX7 1191 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 PCNX4Q63HM2 1172 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 MB21D2Q8IYB1 491 aaPredicted RBP17.32■□□□□ 0.36
VAPA-209ENST00000585042 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
VAPA-209ENST00000585042 CUL5Q93034 780 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 WNT8BQ93098 351 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 RNPEPQ9H4A4 650 aa17.32■□□□□ 0.36
VAPA-209ENST00000585042 LCHNA4D1U4 455 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 SMIM10L2AP0DMW4 78 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 SMIM10L2BP0DMW5 78 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 ANTXR2P58335 489 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
VAPA-209ENST00000585042 TCTN1Q2MV58 587 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 CASC1Q6TDU7 716 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 DBF4BQ8NFT6 615 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.361e-7■■■□□ 15.2
VAPA-209ENST00000585042 GPR20Q99678 358 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 XIRP2A4UGR9 3374 aa17.31■□□□□ 0.36
VAPA-209ENST00000585042 LINC01553A4QN01 128 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 HTRA4P83105 476 aaPredicted RBP17.3■□□□□ 0.36
VAPA-209ENST00000585042 KRT40Q6A162 431 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 CYFIP1Q7L576 1253 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 NLRX1Q86UT6 975 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 ZNF654Q8IZM8 581 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 SEPT8Q92599 483 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 CDHR1Q96JP9 859 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 SAMD11Q96NU1 681 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 SUGCTQ9HAC7 445 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 LY9Q9HBG7 655 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 SEC63Q9UGP8 760 aaKnown RBP17.3■□□□□ 0.36
VAPA-209ENST00000585042 ZNF215Q9UL58 517 aaPredicted RBP17.3■□□□□ 0.36
VAPA-209ENST00000585042 TAF6LQ9Y6J9 622 aa17.3■□□□□ 0.36
VAPA-209ENST00000585042 MEIS2O14770 477 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 TREHO43280 583 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 SORBS3O60504 671 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 CALM1P0DP23 149 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 CALM2P0DP24 149 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 CALM3P0DP25 149 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 COL9A1P20849 921 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 MCM5P33992 734 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 KCNQ1P51787 676 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 ADAM17P78536 824 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 SEMA3FQ13275 785 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 FAM26DQ5JW98 314 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 TMCO2Q7Z6W1 182 aaPredicted RBP17.29■□□□□ 0.36
VAPA-209ENST00000585042 RPAINQ86UA6 219 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 SP7Q8TDD2 431 aaPredicted RBP17.29■□□□□ 0.36
VAPA-209ENST00000585042 APBB2Q92870 758 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 ZFP91Q96JP5 570 aaPredicted RBP17.29■□□□□ 0.36
VAPA-209ENST00000585042 C1QTNF1Q9BXJ1 281 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 BCAS3Q9H6U6 928 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 RTEL1Q9NZ71 1219 aa17.29■□□□□ 0.36
VAPA-209ENST00000585042 RBM8AQ9Y5S9 174 aaKnown RBP17.29■□□□□ 0.36
VAPA-209ENST00000585042 NRCAMQ92823 1304 aa17.28■□□□□ 0.36
VAPA-209ENST00000585042 MAFGO15525 162 aa17.28■□□□□ 0.36
VAPA-209ENST00000585042 LIFRP42702 1097 aa17.28■□□□□ 0.36
VAPA-209ENST00000585042 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
VAPA-209ENST00000585042 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
VAPA-209ENST00000585042 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
VAPA-209ENST00000585042 TOP1MTQ969P6 601 aa17.28■□□□□ 0.36
VAPA-209ENST00000585042 GPRASP2Q96D09 838 aa17.28■□□□□ 0.36
VAPA-209ENST00000585042 TCF20Q9UGU0 1960 aaKnown RBP17.28■□□□□ 0.36
VAPA-209ENST00000585042 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.27■□□□□ 0.36
VAPA-209ENST00000585042 PRC1O43663 620 aa17.27■□□□□ 0.36
VAPA-209ENST00000585042 SPRED2Q7Z698 418 aa17.27■□□□□ 0.36
VAPA-209ENST00000585042 PSTPIP2Q9H939 334 aa17.27■□□□□ 0.36
VAPA-209ENST00000585042 SETD4Q9NVD3 440 aa17.27■□□□□ 0.36
VAPA-209ENST00000585042 CCDC69A6NI79 296 aa17.26■□□□□ 0.35
VAPA-209ENST00000585042 NFXL1Q6ZNB6 911 aa17.26■□□□□ 0.35
VAPA-209ENST00000585042 MYOCDQ8IZQ8 938 aa17.26■□□□□ 0.35
VAPA-209ENST00000585042 SRBD1Q8N5C6 995 aaKnown RBP17.26■□□□□ 0.35
VAPA-209ENST00000585042 FBXO22Q8NEZ5 403 aa17.26■□□□□ 0.35
VAPA-209ENST00000585042 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
VAPA-209ENST00000585042 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
VAPA-209ENST00000585042 MICAL3Q7RTP6 2002 aa17.25■□□□□ 0.35
VAPA-209ENST00000585042 RPLP2P05387 115 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms