RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 IWS1Q96ST2 819 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 PRRX2Q99811 253 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 ZKSCAN3Q9BRR0 538 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 C16orf70Q9BSU1 422 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 LMAN2LQ9H0V9 348 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 PXMP2Q9NR77 195 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 KIAA1671Q9BY89 1806 aa16.53■□□□□ 0.24
CSNK1D-224ENST00000584672 CACNA1HO95180 2353 aa16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 C5orf67F2Z3F1 127 aa16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 CFBP00751 764 aa16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 HOXD8P13378 290 aaPredicted RBP16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 ADAM15Q13444 863 aa16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 ADGRD2Q7Z7M1 963 aa16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 MSLNLQ96KJ4 702 aa16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 RNPEPQ9H4A4 650 aa16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-224ENST00000584672 DOCK5Q9H7D0 1870 aa16.52■□□□□ 0.23
CSNK1D-224ENST00000584672 H0Y858 1186 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 PPFIA4O75335 1185 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 RGS20O76081 388 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 RB1P06400 928 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 FGRP09769 529 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 SP2Q02086 613 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 QRICH1Q2TAL8 776 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 MCF2L2Q86YR7 1114 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 ADGRF4Q8IZF3 695 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 GPKOWQ92917 476 aaPredicted RBP eCLIP16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 RPGRIP1Q96KN7 1286 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 VAT1LQ9HCJ6 419 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 TLR9Q9NR96 1032 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 TCP11L1Q9NUJ3 509 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 SETD4Q9NVD3 440 aa16.51■□□□□ 0.23
CSNK1D-224ENST00000584672 H3BRB1 525 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 MMP1P03956 469 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 GHRP10912 638 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 UBA1P22314 1058 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 CAMK1Q14012 370 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 BTG3Q14201 252 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 PKN1Q16512 942 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 GPATCH4Q5T3I0 446 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 RBM23Q86U06 439 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 IL31RAQ8NI17 732 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 CHMP4BQ9H444 224 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 TUT1Q9H6E5 874 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 BCAS3Q9H6U6 928 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 BARX2Q9UMQ3 279 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 PCDHGC5Q9Y5F6 944 aa16.5■□□□□ 0.23
CSNK1D-224ENST00000584672 TTC41PQ6P2S7 1318 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 CCDC171Q6TFL3 1326 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 CACNA1AO00555 2505 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 LOC730098B7Z3J9 87 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 FGAP02671 866 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 LGALS2P05162 132 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 DNAJB1P25685 340 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 AVPR2P30518 371 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 NRIP1P48552 1158 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 TRIM50Q86XT4 487 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 APBB2Q92870 758 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 DCTPP1Q9H773 170 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 MLXIPQ9HAP2 919 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 MRPL11Q9Y3B7 192 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 RWDD3Q9Y3V2 267 aa16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 USP15Q9Y4E8 981 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-224ENST00000584672 PTPRZ1P23471 2315 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 KDM4AO75164 1064 aa16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 EYA4O95677 639 aa16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 PDGFBP01127 241 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 HSPD1P10809 573 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 HOXA13P31271 388 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 HOXC8P31273 242 aa16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 SIGLEC14Q08ET2 396 aa16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 ASCL5Q7RTU5 278 aa16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 SMRP1Q8NCR6 262 aa16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 PDCD2LQ9BRP1 358 aa16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 PLAGL2Q9UPG8 496 aa16.48■□□□□ 0.23
CSNK1D-224ENST00000584672 GLP2RO95838 553 aa16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 ARHGAP4P98171 946 aa16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 RBM10P98175 930 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 ALX1Q15699 326 aa16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 PAN2Q504Q3 1202 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 TBC1D10CQ8IV04 446 aa16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 PNMA1Q8ND90 353 aa16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 TTC14Q96N46 770 aa16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 RC3H2Q9HBD1 1191 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 MRPL42Q9Y6G3 142 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-224ENST00000584672 NEDD4P46934 1319 aa16.46■□□□□ 0.23
CSNK1D-224ENST00000584672 PLXNA4Q9HCM2 1894 aa16.46■□□□□ 0.23
CSNK1D-224ENST00000584672 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
CSNK1D-224ENST00000584672 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-224ENST00000584672 OPLAHO14841 1288 aa16.46■□□□□ 0.23
CSNK1D-224ENST00000584672 CAND2O75155 1236 aa16.46■□□□□ 0.23
CSNK1D-224ENST00000584672 ITGB1P05556 798 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms