RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 MARCKSP29966 332 aaPredicted RBP20.67■□□□□ 0.9
RFFL-211ENST00000584541 ADCYAP1R1P41586 468 aa20.67■□□□□ 0.9
RFFL-211ENST00000584541 CACNB2Q08289 660 aaPredicted RBP20.67■□□□□ 0.9
RFFL-211ENST00000584541 CLEC17AQ6ZS10 378 aa20.67■□□□□ 0.9
RFFL-211ENST00000584541 KRI1Q8N9T8 703 aaKnown RBP20.67■□□□□ 0.9
RFFL-211ENST00000584541 ATP9AO75110 1047 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 INHAP05111 366 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 AKR1A1P14550 325 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 KCNA2P16389 499 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 UBA1P22314 1058 aaKnown RBP20.66■□□□□ 0.9
RFFL-211ENST00000584541 CNGA1P29973 690 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 ME1P48163 572 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 TNFAIP2Q03169 654 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 LY6KQ17RY6 165 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 SLC9C1Q4G0N8 1177 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 CCDC62Q6P9F0 684 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 FBXO46Q6PJ61 603 aaPredicted RBP20.66■□□□□ 0.9
RFFL-211ENST00000584541 GDPD2Q9HCC8 539 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 PRDM10Q9NQV6 1147 aa20.66■□□□□ 0.9
RFFL-211ENST00000584541 VWA3AA6NCI4 1184 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 GOLGA6L22H0YM25 854 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 DDX39AO00148 427 aaKnown RBP20.65■□□□□ 0.9
RFFL-211ENST00000584541 PSMD10O75832 226 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 ARIH2O95376 493 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 GGPS1O95749 300 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 TECP42680 631 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 FXR2P51116 673 aaKnown RBP eCLIP20.65■□□□□ 0.9
RFFL-211ENST00000584541 TRIM32Q13049 653 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 ITGB3BPQ13352 177 aaPredicted RBP20.65■□□□□ 0.9
RFFL-211ENST00000584541 DUSP28Q4G0W2 176 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 DHX37Q8IY37 1157 aaKnown RBP20.65■□□□□ 0.9
RFFL-211ENST00000584541 GJA10Q969M2 543 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 MLXIPQ9HAP2 919 aa20.65■□□□□ 0.9
RFFL-211ENST00000584541 JPH1Q9HDC5 661 aaPredicted RBP20.65■□□□□ 0.9
RFFL-211ENST00000584541 SRPRBQ9Y5M8 271 aaKnown RBP20.65■□□□□ 0.9
RFFL-211ENST00000584541 ELP1O95163 1332 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 SEPT4O43236 478 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 CUTAO60888 179 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 GH1P01241 217 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 KRT76Q01546 638 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 SP2Q02086 613 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 MAP3K21Q5TCX8 1036 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 CYFIP1Q7L576 1253 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 TRPV1Q8NER1 839 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 HMX1Q9NP08 348 aaPredicted RBP20.64■□□□□ 0.89
RFFL-211ENST00000584541 SLC9A2Q9UBY0 812 aa20.64■□□□□ 0.89
RFFL-211ENST00000584541 FBXO2Q9UK22 296 aaPredicted RBP20.64■□□□□ 0.89
RFFL-211ENST00000584541 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.63■□□□□ 0.89
RFFL-211ENST00000584541 GOLGA6L4A6NEF3 574 aa20.63■□□□□ 0.89
RFFL-211ENST00000584541 DHX15O43143 795 aaKnown RBP20.63■□□□□ 0.89
RFFL-211ENST00000584541 SMPD1P17405 629 aa20.63■□□□□ 0.89
RFFL-211ENST00000584541 LONP1P36776 959 aaKnown RBP20.63■□□□□ 0.89
RFFL-211ENST00000584541 PPP2R5CQ13362 524 aa20.63■□□□□ 0.89
RFFL-211ENST00000584541 LAMC2Q13753 1193 aa20.63■□□□□ 0.89
RFFL-211ENST00000584541 PDIA5Q14554 519 aa20.63■□□□□ 0.89
RFFL-211ENST00000584541 CELF3Q5SZQ8 465 aaKnown RBP20.63■□□□□ 0.89
RFFL-211ENST00000584541 ZNF746Q6NUN9 644 aaPredicted RBP20.63■□□□□ 0.89
RFFL-211ENST00000584541 METTL7BQ6UX53 244 aa20.63■□□□□ 0.89
RFFL-211ENST00000584541 SH3TC2Q8TF17 1288 aa20.63■□□□□ 0.89
RFFL-211ENST00000584541 STK24Q9Y6E0 443 aa20.63■□□□□ 0.89
RFFL-211ENST00000584541 NOP56O00567 594 aaKnown RBP20.62■□□□□ 0.89
RFFL-211ENST00000584541 FARP2O94887 1054 aaPredicted RBP20.62■□□□□ 0.89
RFFL-211ENST00000584541 CCND3P30281 292 aaPredicted RBP20.62■□□□□ 0.89
RFFL-211ENST00000584541 NCAPH2Q6IBW4 605 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 OR6J1Q8NGC5 347 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 ERMNQ8TAM6 284 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 AK8Q96MA6 479 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 AP5M1Q9H0R1 490 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 UNC45AQ9H3U1 944 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 LRWD1Q9UFC0 647 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 VAV3Q9UKW4 847 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 PCDHA7Q9UN72 937 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 Q9Y3F1 56 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 SAMM50Q9Y512 469 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 WDR81Q562E7 1941 aa20.62■□□□□ 0.89
RFFL-211ENST00000584541 CHMP2AO43633 222 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 SORBS3O60504 671 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 MSCO60682 206 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 DUSP11O75319 330 aaKnown RBP20.61■□□□□ 0.89
RFFL-211ENST00000584541 RARBP10826 455 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 SFNP31947 248 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 JAK3P52333 1124 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 SP4Q02446 784 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 IL17AQ16552 155 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 MIER3Q7Z3K6 550 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 SMAP1Q8IYB5 467 aaPredicted RBP20.61■□□□□ 0.89
RFFL-211ENST00000584541 IGSF22Q8N9C0 903 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
RFFL-211ENST00000584541 TMEM87AQ8NBN3 555 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 RDM1Q8NG50 284 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 COPS5Q92905 334 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 EMID1Q96A84 441 aaPredicted RBP20.61■□□□□ 0.89
RFFL-211ENST00000584541 SPATA33Q96N06 139 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 CSRNP2Q9H175 543 aa20.61■□□□□ 0.89
RFFL-211ENST00000584541 POTEMA6NI47 508 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 WDR64B1ANS9 1081 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 TXLNAP40222 546 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 ARHGAP1Q07960 439 aa20.6■□□□□ 0.89
RFFL-211ENST00000584541 GJC2Q5T442 439 aaPredicted RBP20.6■□□□□ 0.89
RFFL-211ENST00000584541 ADALQ6DHV7 355 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms