RNA–Protein interactions for RNA: ENST00000584015.5

EPB41L3-231, Transcript of erythrocyte membrane protein band 4.1 like 3, human

TSL 3

Gene EPB41L3, Length 500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EPB41L3-231	ENST00000584015	RAB11FIP4	Q86YS3	637 aa		32.43	■■■□□ 2.78
EPB41L3-231	ENST00000584015	LRRC2	Q9BYS8	371 aa		32.43	■■■□□ 2.78
EPB41L3-231	ENST00000584015	BCAS3	Q9H6U6	928 aa		32.43	■■■□□ 2.78
EPB41L3-231	ENST00000584015	SPTBN5	Q9NRC6	3674 aa	Known RBP	32.42	■■■□□ 2.78
EPB41L3-231	ENST00000584015	C17orf102	A2RUQ5	167 aa		32.42	■■■□□ 2.78
EPB41L3-231	ENST00000584015	TLL1	O43897	1013 aa		32.42	■■■□□ 2.78
EPB41L3-231	ENST00000584015	HIC1	Q14526	733 aa		32.42	■■■□□ 2.78
EPB41L3-231	ENST00000584015	RNF20	Q5VTR2	975 aa		32.42	■■■□□ 2.78
EPB41L3-231	ENST00000584015	XRRA1	Q6P2D8	792 aa		32.42	■■■□□ 2.78
EPB41L3-231	ENST00000584015	CENPQ	Q7L2Z9	268 aa	Predicted RBP	32.42	■■■□□ 2.78
EPB41L3-231	ENST00000584015	USP26	Q9BXU7	913 aa		32.42	■■■□□ 2.78
EPB41L3-231	ENST00000584015	SERINC5	Q86VE9	423 aa		32.41	■■■□□ 2.78
EPB41L3-231	ENST00000584015	MICU3	Q86XE3	530 aa		32.41	■■■□□ 2.78
EPB41L3-231	ENST00000584015	MICALL1	Q8N3F8	863 aa		32.41	■■■□□ 2.78
EPB41L3-231	ENST00000584015	CERS4	Q9HA82	394 aa		32.41	■■■□□ 2.78
EPB41L3-231	ENST00000584015	SMIM10L2A	P0DMW4	78 aa		32.4	■■■□□ 2.78
EPB41L3-231	ENST00000584015	SMIM10L2B	P0DMW5	78 aa		32.4	■■■□□ 2.78
EPB41L3-231	ENST00000584015	TRAF7	Q6Q0C0	670 aa		32.4	■■■□□ 2.78
EPB41L3-231	ENST00000584015	NLRX1	Q86UT6	975 aa		32.4	■■■□□ 2.78
EPB41L3-231	ENST00000584015	ATP6V0A1	Q93050	837 aa		32.4	■■■□□ 2.78
EPB41L3-231	ENST00000584015	GPR20	Q99678	358 aa		32.4	■■■□□ 2.78
EPB41L3-231	ENST00000584015	PSTPIP2	Q9H939	334 aa		32.4	■■■□□ 2.78
EPB41L3-231	ENST00000584015	REV3L	O60673	3130 aa		32.4	■■■□□ 2.78
EPB41L3-231	ENST00000584015	ABHD14A-ACY1	A0A1B0GW23	586 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	EFCAB14	O75071	495 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	THPO	P40225	353 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	DEFB103A	P81534	67 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	TAP1	Q03518	808 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	TMTC3	Q6ZXV5	915 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	SGMS1	Q86VZ5	419 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	SKAP1	Q86WV1	359 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	CCDC82	Q8N4S0	544 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	ATXN2L	Q8WWM7	1075 aa	Known RBP	32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	ZBED2	Q9BTP6	218 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	ZNF215	Q9UL58	517 aa	Predicted RBP	32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	EMSY	Q7Z589	1322 aa		32.39	■■■□□ 2.78
EPB41L3-231	ENST00000584015	PRRC2B	Q5JSZ5	2229 aa	Known RBP	32.38	■■■□□ 2.77
EPB41L3-231	ENST00000584015	SI	P14410	1827 aa		32.38	■■■□□ 2.77
EPB41L3-231	ENST00000584015	HOXC8	P31273	242 aa		32.38	■■■□□ 2.77
EPB41L3-231	ENST00000584015	SYNE3	Q6ZMZ3	975 aa		32.38	■■■□□ 2.77
EPB41L3-231	ENST00000584015	FANCB	Q8NB91	859 aa		32.38	■■■□□ 2.77
EPB41L3-231	ENST00000584015	SENP7	Q9BQF6	1050 aa		32.38	■■■□□ 2.77
EPB41L3-231	ENST00000584015	hCG_1642624	A0A1W2PR95	340 aa		32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	GTPBP6	O43824	516 aa	Predicted RBP	32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	ARHGEF15	O94989	841 aa		32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	SP4	Q02446	784 aa		32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	IKBKE	Q14164	716 aa		32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	MBTPS1	Q14703	1052 aa		32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	TCTN1	Q2MV58	587 aa		32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	ARNTL2	Q8WYA1	636 aa		32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	TSPYL2	Q9H2G4	693 aa	Predicted RBP	32.37	■■■□□ 2.77
EPB41L3-231	ENST00000584015	TTC28	Q96AY4	2481 aa		32.36	■■■□□ 2.77
EPB41L3-231	ENST00000584015	RFXAP	O00287	272 aa		32.36	■■■□□ 2.77
EPB41L3-231	ENST00000584015	TMCO2	Q7Z6W1	182 aa	Predicted RBP	32.36	■■■□□ 2.77
EPB41L3-231	ENST00000584015	TRIM50	Q86XT4	487 aa		32.36	■■■□□ 2.77
EPB41L3-231	ENST00000584015	GIMAP8	Q8ND71	665 aa	Predicted RBP	32.36	■■■□□ 2.77
EPB41L3-231	ENST00000584015	SPDYE3	A6NKU9	549 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	RSPH10B2	B2RC85	870 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	LGR5	O75473	907 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	RSPH10B	P0C881	870 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	UBE2S	Q16763	222 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	UTP14C	Q5TAP6	766 aa	Known RBP	32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	HEATR3	Q7Z4Q2	680 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	GPRASP2	Q96D09	838 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	CDHR1	Q96JP9	859 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	NEK1	Q96PY6	1258 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	RNPEP	Q9H4A4	650 aa		32.35	■■■□□ 2.77
EPB41L3-231	ENST00000584015	EPOP	A6NHQ4	379 aa		32.34	■■■□□ 2.77
EPB41L3-231	ENST00000584015	TREH	O43280	583 aa		32.34	■■■□□ 2.77
EPB41L3-231	ENST00000584015	GNAT1	P11488	350 aa		32.34	■■■□□ 2.77
EPB41L3-231	ENST00000584015	APOA5	Q6Q788	366 aa		32.34	■■■□□ 2.77
EPB41L3-231	ENST00000584015	ASB2	Q96Q27	587 aa		32.33	■■■□□ 2.77
EPB41L3-231	ENST00000584015	RBM28	Q9NW13	759 aa	Known RBP	32.33	■■■□□ 2.77
EPB41L3-231	ENST00000584015	MTCH2	Q9Y6C9	303 aa		32.33	■■■□□ 2.77
EPB41L3-231	ENST00000584015	CNTNAP5	Q8WYK1	1306 aa		32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	LCHN	A4D1U4	455 aa		32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	CAND2	O75155	1236 aa		32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	GJB5	O95377	273 aa		32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	POU3F3	P20264	500 aa	Predicted RBP	32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	MRPS5	P82675	430 aa	Known RBP	32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	EHMT1	Q9H9B1	1298 aa		32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	SETD4	Q9NVD3	440 aa		32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	TELO2	Q9Y4R8	837 aa		32.32	■■■□□ 2.76
EPB41L3-231	ENST00000584015	CDC45	O75419	566 aa		32.31	■■■□□ 2.76
EPB41L3-231	ENST00000584015	CTSH	P09668	335 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	KCNA2	P16389	499 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	TCF7	P36402	384 aa	Predicted RBP	32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	MTMR1	Q13613	665 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	SKIV2L	Q15477	1246 aa	Known RBP	32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	SPRED2	Q7Z698	418 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	IL27	Q8NEV9	243 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	DBF4B	Q8NFT6	615 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	TCEANC2	Q96MN5	208 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	RAD9A	Q99638	391 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	PCDHA6	Q9UN73	950 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	PCDHA8	Q9Y5H6	950 aa		32.3	■■■□□ 2.76
EPB41L3-231	ENST00000584015	ITGB5	P18084	799 aa		32.29	■■■□□ 2.76
EPB41L3-231	ENST00000584015	ARHGAP4	P98171	946 aa		32.29	■■■□□ 2.76
EPB41L3-231	ENST00000584015	RTN1	Q16799	776 aa		32.29	■■■□□ 2.76
EPB41L3-231	ENST00000584015	PLEKHG4	Q58EX7	1191 aa		32.29	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms