RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 PDGFCQ9NRA1 345 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 TCEAL9Q9UHQ7 104 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
CDRT1-207ENST00000583965 SEPT4O43236 478 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 GAS7O60861 476 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 ATP9AO75110 1047 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 PSMD10O75832 226 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 ARIH2O95376 493 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 UBA1P22314 1058 aaKnown RBP13.16□□□□□ -0.3
CDRT1-207ENST00000583965 ADCYAP1R1P41586 468 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDRT1-207ENST00000583965 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 DTHD1Q6ZMT9 781 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 TRPV1Q8NER1 839 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 LEO1Q8WVC0 666 aaPredicted RBP13.16□□□□□ -0.3
CDRT1-207ENST00000583965 EMID1Q96A84 441 aaPredicted RBP13.16□□□□□ -0.3
CDRT1-207ENST00000583965 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 RAB34Q9BZG1 259 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 TTC12Q9H892 705 aaPredicted RBP13.16□□□□□ -0.3
CDRT1-207ENST00000583965 Q9Y3F1 56 aa13.16□□□□□ -0.3
CDRT1-207ENST00000583965 SRPRBQ9Y5M8 271 aaKnown RBP13.16□□□□□ -0.3
CDRT1-207ENST00000583965 ELP1O95163 1332 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
CDRT1-207ENST00000583965 MSCO60682 206 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 GGPS1O95749 300 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 GH1P01241 217 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 TXKP42681 527 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 KRT76Q01546 638 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 SP2Q02086 613 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 TRIM32Q13049 653 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 ITGB3BPQ13352 177 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-207ENST00000583965 PPP2R5CQ13362 524 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 PDIA5Q14554 519 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 CELF3Q5SZQ8 465 aaKnown RBP13.15□□□□□ -0.3
CDRT1-207ENST00000583965 ZNF746Q6NUN9 644 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-207ENST00000583965 METTL7BQ6UX53 244 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
CDRT1-207ENST00000583965 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
CDRT1-207ENST00000583965 HMX1Q9NP08 348 aaPredicted RBP13.15□□□□□ -0.3
CDRT1-207ENST00000583965 SLC9A2Q9UBY0 812 aa13.15□□□□□ -0.3
CDRT1-207ENST00000583965 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 CUTAO60888 179 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 DUSP11O75319 330 aaKnown RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 FARP2O94887 1054 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 SMPD1P17405 629 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 MARCKSP29966 332 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 CNGA1P29973 690 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 SFNP31947 248 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 LONP1P36776 959 aaKnown RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 LAMC2Q13753 1193 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 B3GNT9Q6UX72 402 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 CYFIP1Q7L576 1253 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 SMAP1Q8IYB5 467 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 RDM1Q8NG50 284 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 AK8Q96MA6 479 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 MLXIPQ9HAP2 919 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 PKD2L1Q9P0L9 805 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 FBXO2Q9UK22 296 aaPredicted RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 VAV3Q9UKW4 847 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 GNEQ9Y223 722 aaKnown RBP13.14□□□□□ -0.31
CDRT1-207ENST00000583965 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
CDRT1-207ENST00000583965 ARID2Q68CP9 1835 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 RARBP10826 455 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 CCND3P30281 292 aaPredicted RBP13.13□□□□□ -0.31
CDRT1-207ENST00000583965 TECP42680 631 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 ME1P48163 572 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 JAK3P52333 1124 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 SPIRE1Q08AE8 756 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 IGSF22Q8N9C0 903 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
CDRT1-207ENST00000583965 TMEM87AQ8NBN3 555 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 SH3TC2Q8TF17 1288 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 GJA10Q969M2 543 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 ARMC5Q96C12 935 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 CHAMP1Q96JM3 812 aa13.13□□□□□ -0.31
CDRT1-207ENST00000583965 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
CDRT1-207ENST00000583965 DDX11L8A8MPP1 907 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 WDR64B1ANS9 1081 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 NOP56O00567 594 aaKnown RBP13.12□□□□□ -0.31
CDRT1-207ENST00000583965 ADCY6O43306 1168 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 SLC26A4O43511 780 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 PTMSP20962 102 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 MCM4P33991 863 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 NKX3-2P78367 333 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 IL17AQ16552 155 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 BRDTQ58F21 947 aaPredicted RBP13.12□□□□□ -0.31
CDRT1-207ENST00000583965 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 OR6J1Q8NGC5 347 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 PPTC7Q8NI37 304 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 ERMNQ8TAM6 284 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 NEK9Q8TD19 979 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 SEPT1Q8WYJ6 367 aa13.12□□□□□ -0.31
CDRT1-207ENST00000583965 COPS5Q92905 334 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms