RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 GLT8D2Q9H1C3 349 aa19.27■□□□□ 0.68
TSEN54-211ENST00000583818 KCNJ14Q9UNX9 436 aa19.27■□□□□ 0.68
TSEN54-211ENST00000583818 LAMA2P24043 3122 aaKnown RBP19.27■□□□□ 0.67
TSEN54-211ENST00000583818 TIMP1P01033 207 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 GNA11P29992 359 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 ST3GAL1Q11201 340 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 MFSD10Q14728 455 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 C9orf50Q5SZB4 431 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 UTP14CQ5TAP6 766 aaKnown RBP19.26■□□□□ 0.67
TSEN54-211ENST00000583818 METTL7BQ6UX53 244 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 GTF3C6Q969F1 213 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 GPR20Q99678 358 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 KCNH7Q9NS40 1196 aa19.26■□□□□ 0.67
TSEN54-211ENST00000583818 FAM86B1E9PN63 330 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 JAK2O60674 1132 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 PPFIA4O75335 1185 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 CDKL5O76039 1030 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 F2P00734 622 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 FAM86B2P0C5J1 330 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
TSEN54-211ENST00000583818 ZNF76P36508 570 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 FXR1P51114 621 aaKnown RBP eCLIP19.25■□□□□ 0.67
TSEN54-211ENST00000583818 FOSBP53539 338 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 CCL23P55773 120 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 KIAA0753Q2KHM9 967 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 GDF6Q6KF10 455 aaPredicted RBP19.25■□□□□ 0.67
TSEN54-211ENST00000583818 NFRKBQ6P4R8 1299 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 TDHQ8IZJ6 230 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 C16orf70Q9BSU1 422 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 HIPK3Q9H422 1215 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 SH3GLB2Q9NR46 395 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 HDAC6Q9UBN7 1215 aa19.25■□□□□ 0.67
TSEN54-211ENST00000583818 SOX1O00570 391 aaPredicted RBP19.24■□□□□ 0.67
TSEN54-211ENST00000583818 LGALS2P05162 132 aa19.24■□□□□ 0.67
TSEN54-211ENST00000583818 ZNF200P98182 395 aaPredicted RBP19.24■□□□□ 0.67
TSEN54-211ENST00000583818 HIC1Q14526 733 aa19.24■□□□□ 0.67
TSEN54-211ENST00000583818 SHHQ15465 462 aa19.24■□□□□ 0.67
TSEN54-211ENST00000583818 NPY5RQ15761 445 aa19.24■□□□□ 0.67
TSEN54-211ENST00000583818 CEP55Q53EZ4 464 aa19.24■□□□□ 0.67
TSEN54-211ENST00000583818 CRYGNQ8WXF5 182 aa19.24■□□□□ 0.67
TSEN54-211ENST00000583818 SENP7Q9BQF6 1050 aa19.24■□□□□ 0.67
TSEN54-211ENST00000583818 NOC4LQ9BVI4 516 aaKnown RBP19.24■□□□□ 0.67
TSEN54-211ENST00000583818 ORC3Q9UBD5 711 aaPredicted RBP19.24■□□□□ 0.67
TSEN54-211ENST00000583818 SZT2Q5T011 3432 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 DDX39AO00148 427 aaKnown RBP19.23■□□□□ 0.67
TSEN54-211ENST00000583818 HAS3O00219 553 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 EDIL3O43854 480 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 ACRP10323 421 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 FDPSP14324 419 aaKnown RBP19.23■□□□□ 0.67
TSEN54-211ENST00000583818 CSF2RAP15509 400 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 RBM25P49756 843 aaKnown RBP19.23■□□□□ 0.67
TSEN54-211ENST00000583818 FPGSQ05932 587 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 ITGB3BPQ13352 177 aaPredicted RBP19.23■□□□□ 0.67
TSEN54-211ENST00000583818 MFSD5Q6N075 450 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 PLA2G4DQ86XP0 818 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 C7orf31Q8N865 590 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 NSUN7Q8NE18 718 aaKnown RBP19.23■□□□□ 0.67
TSEN54-211ENST00000583818 BICD2Q8TD16 824 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 CDHR1Q96JP9 859 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 WNT8AQ9H1J5 351 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 AGO4Q9HCK5 861 aaKnown RBP19.23■□□□□ 0.67
TSEN54-211ENST00000583818 PCDHA4Q9UN74 947 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
TSEN54-211ENST00000583818 GSTTP1A0A1W2PQM5 241 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 MEIS1O00470 390 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 PTGISQ16647 500 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 TEX2Q8IWB9 1127 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 CCDC83Q8IWF9 413 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 BLIDQ8IZY5 108 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 SCLYQ96I15 445 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 LRCH3Q96II8 777 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 CTAGE1Q96RT6 745 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 SEZ6LQ9BYH1 1024 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 NOD1Q9Y239 953 aa19.22■□□□□ 0.67
TSEN54-211ENST00000583818 IGLV3-22A0A075B6J6 115 aa19.21■□□□□ 0.67
TSEN54-211ENST00000583818 H3BRB1 525 aa19.21■□□□□ 0.67
TSEN54-211ENST00000583818 CYP3A4P08684 503 aa19.21■□□□□ 0.67
TSEN54-211ENST00000583818 TCF7P36402 384 aaPredicted RBP19.21■□□□□ 0.67
TSEN54-211ENST00000583818 GIMAP8Q8ND71 665 aaPredicted RBP19.21■□□□□ 0.67
TSEN54-211ENST00000583818 OXER1Q8TDS5 423 aa19.21■□□□□ 0.67
TSEN54-211ENST00000583818 KATNAL1Q9BW62 490 aa19.21■□□□□ 0.67
TSEN54-211ENST00000583818 TUT1Q9H6E5 874 aaKnown RBP19.21■□□□□ 0.67
TSEN54-211ENST00000583818 JPH1Q9HDC5 661 aaPredicted RBP19.21■□□□□ 0.67
TSEN54-211ENST00000583818 GTF2IRD1Q9UHL9 959 aa19.21■□□□□ 0.67
TSEN54-211ENST00000583818 LIMCH1Q9UPQ0 1083 aa19.21■□□□□ 0.67
TSEN54-211ENST00000583818 A0A1W2PPC1 479 aa19.2■□□□□ 0.66
TSEN54-211ENST00000583818 SUPT20HL2P0C7V6 817 aa19.2■□□□□ 0.66
TSEN54-211ENST00000583818 MARK3P27448 753 aa19.2■□□□□ 0.66
TSEN54-211ENST00000583818 PTPN11Q06124 597 aaPredicted RBP19.2■□□□□ 0.66
TSEN54-211ENST00000583818 PRR16Q569H4 304 aa19.2■□□□□ 0.66
TSEN54-211ENST00000583818 C16orf59Q7L2K0 433 aa19.2■□□□□ 0.66
TSEN54-211ENST00000583818 DHX38Q92620 1227 aaKnown RBP19.2■□□□□ 0.66
TSEN54-211ENST00000583818 WNT8BQ93098 351 aa19.2■□□□□ 0.66
TSEN54-211ENST00000583818 PHF20Q9BVI0 1012 aa19.2■□□□□ 0.66
TSEN54-211ENST00000583818 SLC9A2Q9UBY0 812 aa19.2■□□□□ 0.66
TSEN54-211ENST00000583818 TRIP12Q14669 1992 aaPredicted RBP19.2■□□□□ 0.66
TSEN54-211ENST00000583818 SCN5AQ14524 2016 aa19.19■□□□□ 0.66
TSEN54-211ENST00000583818 M0R2N6 131 aa19.19■□□□□ 0.66
TSEN54-211ENST00000583818 MAFGO15525 162 aa19.19■□□□□ 0.66
TSEN54-211ENST00000583818 SMIM10L2AP0DMW4 78 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms