RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 GREB1LQ9C091 1923 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 GOLGA6L9A6NEM1 432 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 H3BQF6 201 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PRPF6O94906 941 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 EGFRP00533 1210 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CYP11B2P19099 503 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 AMPD2Q01433 879 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ZNF771Q7L3S4 317 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 MAEAQ7L5Y9 396 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PODNQ7Z5L7 613 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 GOLPH3Q9H4A6 298 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.87□□□□□ -0.513e-6■■■■■ 28.8
CDK5RAP3-225ENST00000582482 FAM53CQ9NYF3 392 aa11.87□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CLIC2O15247 247 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 C2orf54Q08AI8 447 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 STRIP1Q5VSL9 837 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 GJB7Q6PEY0 223 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 RUSC1Q9BVN2 902 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ABCB6Q9NP58 842 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 BICDL2A1A5D9 508 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PSMD14O00487 310 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CAPN15O75808 1086 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 HOXD13P35453 343 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 AMPD3Q01432 767 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 EHHADHQ08426 723 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SPIRE1Q08AE8 756 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PLS1Q14651 629 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CCDC40Q4G0X9 1142 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PPP4R3AQ6IN85 833 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SFR1Q86XK3 245 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CERS3Q8IU89 383 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PROCA1Q8NCQ7 364 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ETNPPLQ8TBG4 499 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CCDC51Q96ER9 411 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PURBQ96QR8 312 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 WDR18Q9BV38 432 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 AJAP1Q9UKB5 411 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PRR12Q9ULL5 1215 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 MYO6Q9UM54 1294 aa11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PACSIN2Q9UNF0 486 aaPredicted RBP11.86□□□□□ -0.51
CDK5RAP3-225ENST00000582482 A0A1W2PQC6 194 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 MSH4O15457 936 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 TLR2O60603 784 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PHACTR2O75167 634 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SMARCA1P28370 1054 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CASP4P49662 377 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 COG2Q14746 738 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 LONRF2Q1L5Z9 754 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SYDE2Q5VT97 1194 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 TATDN1Q6P1N9 297 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 FBXO11Q86XK2 927 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 COG1Q8WTW3 980 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 REEP2Q9BRK0 252 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 LSM14BQ9BX40 385 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PACSIN1Q9BY11 444 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 CUEDC2Q9H467 287 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 KCNMB3Q9NPA1 279 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 WRAP73Q9P2S5 460 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PCDHA2Q9Y5H9 948 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ASTN2O75129 1339 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 TMEM150BA6NC51 233 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 NOL4O94818 638 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 MYBL2P10244 700 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ZBED6P86452 979 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 MEA1Q16626 185 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ZC2HC1CQ53FD0 456 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 NFRKBQ6P4R8 1299 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 HDAC7Q8WUI4 952 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 FUT8Q9BYC5 575 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 BHMT2Q9H2M3 363 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 STK17AQ9UEE5 414 aa11.85□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ZNF646O15015 1829 aaPredicted RBP11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 BMP3P12645 472 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 OAS2P29728 719 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 SLC12A3P55017 1021 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 POLR2FP61218 127 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 RASSF7Q02833 373 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PDIA5Q14554 519 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 TSR1Q2NL82 804 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 GUF1Q8N442 669 aaKnown RBP11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 BAP1Q92560 729 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 ELMO3Q96BJ8 720 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 JADE2Q9NQC1 790 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 HOMER2Q9NSB8 354 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 KIF11P52732 1056 aa11.84□□□□□ -0.51
CDK5RAP3-225ENST00000582482 PPARDQ03181 441 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms