RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 LRCH2Q5VUJ6 765 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 IQSEC1Q6DN90 963 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 KCNV1Q6PIU1 500 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 DTHD1Q6ZMT9 781 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 FERMT2Q96AC1 680 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 CLIC6Q96NY7 704 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 GBP4Q96PP9 640 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 RIT2Q99578 217 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 SENP7Q9BQF6 1050 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 TTC12Q9H892 705 aaPredicted RBP10.77□□□□□ -0.69
RFFL-210ENST00000582308 NRBP1Q9UHY1 535 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 VAV3Q9UKW4 847 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 PCDHA7Q9UN72 937 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 PCDHA12Q9UN75 941 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 TELO2Q9Y4R8 837 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 NFASCO94856 1347 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.69
RFFL-210ENST00000582308 VWA3AA6NCI4 1184 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 DDX39AO00148 427 aaKnown RBP10.76□□□□□ -0.69
RFFL-210ENST00000582308 SORBS3O60504 671 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 GAS7O60861 476 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 CUTAO60888 179 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 TXNP10599 105 aaKnown RBP10.76□□□□□ -0.69
RFFL-210ENST00000582308 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
RFFL-210ENST00000582308 SMPD1P17405 629 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 GRK4P32298 578 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 ME1P48163 572 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
RFFL-210ENST00000582308 SPIRE1Q08AE8 756 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 CELF3Q5SZQ8 465 aaKnown RBP10.76□□□□□ -0.69
RFFL-210ENST00000582308 MAP3K21Q5TCX8 1036 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 B3GNT9Q6UX72 402 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 CYFIP1Q7L576 1253 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 CTU1Q7Z7A3 348 aaKnown RBP10.76□□□□□ -0.69
RFFL-210ENST00000582308 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
RFFL-210ENST00000582308 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 COPS5Q92905 334 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 TEKT3Q9BXF9 490 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 CSRNP2Q9H175 543 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 UNC45AQ9H3U1 944 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 TBC1D22BQ9NU19 505 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 ELP1O95163 1332 aa10.76□□□□□ -0.69
RFFL-210ENST00000582308 POTEFA5A3E0 1075 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 POTEMA6NI47 508 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 EML1O00423 815 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 GADD45BO75293 160 aaPredicted RBP10.75□□□□□ -0.69
RFFL-210ENST00000582308 PRPF40AO75400 957 aaKnown RBP10.75□□□□□ -0.69
RFFL-210ENST00000582308 FARP2O94887 1054 aaPredicted RBP10.75□□□□□ -0.69
RFFL-210ENST00000582308 GGPS1O95749 300 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 CCNE2O96020 404 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 INHAP05111 366 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 CCND3P30281 292 aaPredicted RBP10.75□□□□□ -0.69
RFFL-210ENST00000582308 TNFAIP2Q03169 654 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 ARHGAP1Q07960 439 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 PPP2R5CQ13362 524 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 NEDD9Q14511 834 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 PDIA5Q14554 519 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 DUSP28Q4G0W2 176 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 SPECC1Q5M775 1068 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 USP49Q70CQ1 688 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 IGSF22Q8N9C0 903 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
RFFL-210ENST00000582308 SH3TC2Q8TF17 1288 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 SDF4Q9BRK5 362 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 FAM184BQ9ULE4 1060 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 KAT6AQ92794 2004 aa10.75□□□□□ -0.69
RFFL-210ENST00000582308 PP2D1A8MPX8 630 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 SEPT4O43236 478 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 CDC25AP30304 524 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 LONP1P36776 959 aaKnown RBP10.74□□□□□ -0.69
RFFL-210ENST00000582308 CSPP1Q1MSJ5 1256 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 TMEM266Q2M3C6 531 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 ADALQ6DHV7 355 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 ZNF746Q6NUN9 644 aaPredicted RBP10.74□□□□□ -0.69
RFFL-210ENST00000582308 SHC4Q6S5L8 630 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 METTL7BQ6UX53 244 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 DHX37Q8IY37 1157 aaKnown RBP10.74□□□□□ -0.69
RFFL-210ENST00000582308 GIMAP8Q8ND71 665 aaPredicted RBP10.74□□□□□ -0.69
RFFL-210ENST00000582308 LENG1Q96BZ8 264 aaPredicted RBP10.74□□□□□ -0.69
RFFL-210ENST00000582308 EPSTI1Q96J88 318 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 MMTAG2Q9BU76 263 aaKnown RBP10.74□□□□□ -0.69
RFFL-210ENST00000582308 JPH1Q9HDC5 661 aaPredicted RBP10.74□□□□□ -0.69
RFFL-210ENST00000582308 LMBRD1Q9NUN5 540 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 SLC9A2Q9UBY0 812 aa10.74□□□□□ -0.69
RFFL-210ENST00000582308 GNEQ9Y223 722 aaKnown RBP10.74□□□□□ -0.69
RFFL-210ENST00000582308 GSTTP1A0A1W2PQM5 241 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 NKRFO15226 690 aaKnown RBP eCLIP10.73□□□□□ -0.69
RFFL-210ENST00000582308 CHMP2AO43633 222 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 DUSP11O75319 330 aaKnown RBP10.73□□□□□ -0.69
RFFL-210ENST00000582308 GH1P01241 217 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 AKR1A1P14550 325 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 CMA1P23946 247 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 CNGA1P29973 690 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 MCM4P33991 863 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 ACTR2P61160 394 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 IRX5P78411 483 aaPredicted RBP10.73□□□□□ -0.69
RFFL-210ENST00000582308 KRT76Q01546 638 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 SP4Q02446 784 aa10.73□□□□□ -0.69
RFFL-210ENST00000582308 LAMC2Q13753 1193 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms