RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ARHGAP39Q9C0H5 1083 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 FBXO28Q9NVF7 368 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 MAP3K20Q9NYL2 800 aaKnown RBP10.39□□□□□ -0.75
SS18-220ENST00000582092 IFNKQ9P0W0 207 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 PTCH2Q9Y6C5 1203 aa10.39□□□□□ -0.75
SS18-220ENST00000582092 RBBP6Q7Z6E9 1792 aaKnown RBP10.39□□□□□ -0.75
SS18-220ENST00000582092 SYNRGQ9UMZ2 1314 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 ZSWIM8A7E2V4 1837 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 PSMA7O14818 248 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 ECM2O94769 699 aaPredicted RBP10.38□□□□□ -0.75
SS18-220ENST00000582092 CYP3A4P08684 503 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 VCAM1P19320 739 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 GRK4P32298 578 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 GSDMDP57764 484 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 HERVK_113P62684 666 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 PAK1Q13153 545 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 KCNB1Q14721 858 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 COG2Q14746 738 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 SPATA1Q5VX52 437 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 NCAPH2Q6IBW4 605 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 CNNM4Q6P4Q7 775 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 CCDC186Q7Z3E2 898 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 SLAIN1Q8ND83 568 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 GPRC5AQ8NFJ5 357 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 SPATA20Q8TB22 786 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 LARP4BQ92615 738 aaKnown RBP10.38□□□□□ -0.75
SS18-220ENST00000582092 AGBL1Q96MI9 1066 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 CTAGE1Q96RT6 745 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 C7orf25Q9BPX7 421 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 RAVER2Q9HCJ3 691 aaKnown RBP10.38□□□□□ -0.75
SS18-220ENST00000582092 FANCLQ9NW38 375 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 HOXC10Q9NYD6 342 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 IMPACTQ9P2X3 320 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 MAGEC2Q9UBF1 373 aaPredicted RBP10.38□□□□□ -0.75
SS18-220ENST00000582092 PPP1R9AQ9ULJ8 1098 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 CTNND2Q9UQB3 1225 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 ZKSCAN5Q9Y2L8 839 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 NFE2L3Q9Y4A8 694 aa10.38□□□□□ -0.75
SS18-220ENST00000582092 BICDL2A1A5D9 508 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 POTEMA6NI47 508 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 KIF20AO95235 890 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 FGFR1OPO95684 399 aaKnown RBP10.37□□□□□ -0.75
SS18-220ENST00000582092 IDEP14735 1019 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 CAPN2P17655 700 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 CASP1P29466 404 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 MAPK4P31152 587 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 CIITAP33076 1130 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 STX17P56962 302 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 SETQ01105 290 aaPredicted RBP10.37□□□□□ -0.75
SS18-220ENST00000582092 SPAG1Q07617 926 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 PDE4DQ08499 809 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 PLS1Q14651 629 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 KMT5BQ4FZB7 885 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 RAD54LQ92698 747 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 TRERF1Q96PN7 1200 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 P2RX7Q99572 595 aaKnown RBP10.37□□□□□ -0.75
SS18-220ENST00000582092 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
SS18-220ENST00000582092 HOMER2Q9NSB8 354 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 EMILIN3Q9NT22 766 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 KBTBD4Q9NVX7 518 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 MORF4L1Q9UBU8 362 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 DNM3Q9UQ16 869 aa10.37□□□□□ -0.75
SS18-220ENST00000582092 PVALEFA0A1B0GWK0 134 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 AP5Z1O43299 807 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 GAS7O60861 476 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 TPM1P09493 284 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 PSMD2Q13200 908 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 GRB10Q13322 594 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 IRF5Q13568 498 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 MCM6Q14566 821 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 DNTTIP2Q5QJE6 756 aaKnown RBP10.36□□□□□ -0.75
SS18-220ENST00000582092 LRCH2Q5VUJ6 765 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 NSMFQ6X4W1 530 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 RNF207Q6ZRF8 634 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 CATSPERGQ6ZRH7 1159 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 TMC6Q7Z403 805 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 FILIP1Q7Z7B0 1213 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 CCDC65Q8IXS2 484 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 PXYLP1Q8TE99 480 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 NOC3LQ8WTT2 800 aaKnown RBP10.36□□□□□ -0.75
SS18-220ENST00000582092 NELFBQ8WX92 580 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 HAS1Q92839 578 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 ZNF333Q96JL9 665 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 MBOAT7Q96N66 472 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 UIMC1Q96RL1 719 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 ZNF577Q9BSK1 485 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 PAGR1Q9BTK6 254 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 TEKT3Q9BXF9 490 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 XPO4Q9C0E2 1151 aaKnown RBP10.36□□□□□ -0.75
SS18-220ENST00000582092 SLC38A10Q9HBR0 1119 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 KCNMB3Q9NPA1 279 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 RWDD2AQ9UIY3 292 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 KIAA1024Q9UPX6 916 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.36□□□□□ -0.75
SS18-220ENST00000582092 IVNS1ABPQ9Y6Y0 642 aa10.36□□□□□ -0.75
SS18-220ENST00000582092 VWA5AO00534 786 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 ADCY3O60266 1144 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 RHOBTB3O94955 611 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 PTGS1P23219 599 aa10.35□□□□□ -0.75
SS18-220ENST00000582092 DSG3P32926 999 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms