RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 SLC5A5Q92911 643 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 ZSCAN16Q9H4T2 348 aaPredicted RBP17.12■□□□□ 0.33
MKS1-210ENST00000581180 KCNMB3Q9NPA1 279 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
MKS1-210ENST00000581180 KAT6AQ92794 2004 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
MKS1-210ENST00000581180 BRD1O95696 1058 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 CAPN2P17655 700 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
MKS1-210ENST00000581180 LAMC2Q13753 1193 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 NBR1Q14596 966 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 LRRC41Q15345 812 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 ZNF174Q15697 407 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
MKS1-210ENST00000581180 CYFIP1Q7L576 1253 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
MKS1-210ENST00000581180 HAS1Q92839 578 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 AP5M1Q9H0R1 490 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.11■□□□□ 0.33
MKS1-210ENST00000581180 PKD2L1Q9P0L9 805 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 PCDHB6Q9Y5E3 794 aa17.11■□□□□ 0.33
MKS1-210ENST00000581180 A6NJR5 290 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 TBX3O15119 743 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 SORBS3O60504 671 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 F13A1P00488 732 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 C6orf222P0C671 652 aaPredicted RBP17.1■□□□□ 0.33
MKS1-210ENST00000581180 HSDL1Q3SXM5 330 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 C4orf32Q8N8J7 132 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 PPTC7Q8NI37 304 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 AFG1LQ8WV93 481 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 GJA10Q969M2 543 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 UIMC1Q96RL1 719 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 TMEM60Q9H2L4 133 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 MLXIPQ9HAP2 919 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 SPC25Q9HBM1 224 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 TBC1D22BQ9NU19 505 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 TELO2Q9Y4R8 837 aa17.1■□□□□ 0.33
MKS1-210ENST00000581180 NEMFO60524 1076 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 PSMD10O75832 226 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 TFRCP02786 760 aaKnown RBP17.09■□□□□ 0.33
MKS1-210ENST00000581180 HOXD8P13378 290 aaPredicted RBP17.09■□□□□ 0.33
MKS1-210ENST00000581180 MCM7P33993 719 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 BEX3Q00994 111 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 FSCN1Q16658 493 aaKnown RBP17.09■□□□□ 0.33
MKS1-210ENST00000581180 FAM173BQ6P4H8 233 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 B3GNT9Q6UX72 402 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 RNF180Q86T96 592 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 FAM20AQ96MK3 541 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 RIT2Q99578 217 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 SDF4Q9BRK5 362 aa17.09■□□□□ 0.33
MKS1-210ENST00000581180 JPH1Q9HDC5 661 aaPredicted RBP17.09■□□□□ 0.33
MKS1-210ENST00000581180 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.33
MKS1-210ENST00000581180 MMP3P08254 477 aa17.08■□□□□ 0.32
MKS1-210ENST00000581180 EN2P19622 333 aaPredicted RBP17.08■□□□□ 0.32
MKS1-210ENST00000581180 CPT1AP50416 773 aa17.08■□□□□ 0.32
MKS1-210ENST00000581180 CALCRLQ16602 461 aa17.08■□□□□ 0.32
MKS1-210ENST00000581180 GNASQ5JWF2 1037 aa17.08■□□□□ 0.32
MKS1-210ENST00000581180 FOXD4L5Q5VV16 416 aaPredicted RBP17.08■□□□□ 0.32
MKS1-210ENST00000581180 ANKLE1Q8NAG6 615 aa17.08■□□□□ 0.32
MKS1-210ENST00000581180 FOXD4L4Q8WXT5 416 aaPredicted RBP17.08■□□□□ 0.32
MKS1-210ENST00000581180 GPR20Q99678 358 aa17.08■□□□□ 0.32
MKS1-210ENST00000581180 TSEN34Q9BSV6 310 aaKnown RBP17.08■□□□□ 0.32
MKS1-210ENST00000581180 SLC9A2Q9UBY0 812 aa17.08■□□□□ 0.32
MKS1-210ENST00000581180 GSTTP1A0A1W2PQM5 241 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 CCDC85CA6NKD9 419 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 DDX39AO00148 427 aaKnown RBP17.07■□□□□ 0.32
MKS1-210ENST00000581180 DNM1LO00429 736 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 GAS7O60861 476 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 CCNE2O96020 404 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 KCNA10Q16322 511 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 LRCH2Q5VUJ6 765 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 SLFN12Q8IYM2 578 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 PCSK9Q8NBP7 692 aaKnown RBP17.07■□□□□ 0.32
MKS1-210ENST00000581180 TEKT3Q9BXF9 490 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
MKS1-210ENST00000581180 VAV3Q9UKW4 847 aa17.07■□□□□ 0.32
MKS1-210ENST00000581180 PPFIA4O75335 1185 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 ATG7O95352 703 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 OR52Z1P0C646 297 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 KRT76Q01546 638 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 PTGDRQ13258 359 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 BRDTQ58F21 947 aaPredicted RBP17.06■□□□□ 0.32
MKS1-210ENST00000581180 ZNF746Q6NUN9 644 aaPredicted RBP17.06■□□□□ 0.32
MKS1-210ENST00000581180 SEPT1Q8WYJ6 367 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 IPO9Q96P70 1041 aaKnown RBP17.06■□□□□ 0.32
MKS1-210ENST00000581180 UNC45AQ9H3U1 944 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 PHF24Q9UPV7 400 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
MKS1-210ENST00000581180 ELP1O95163 1332 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 MOXD2PA6NHM9 499 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 NOP56O00567 594 aaKnown RBP17.05■□□□□ 0.32
MKS1-210ENST00000581180 ZEB2O60315 1214 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 BAG4O95429 457 aaKnown RBP17.05■□□□□ 0.32
MKS1-210ENST00000581180 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
MKS1-210ENST00000581180 ASGR1P07306 291 aa17.05■□□□□ 0.32
MKS1-210ENST00000581180 ACLYP53396 1101 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms