RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MRPL12P52815 198 aaKnown RBP22.5■■□□□ 1.19
LIMD2-209ENST00000580222 BMP8AQ7Z5Y6 402 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 PPTC7Q8NI37 304 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 UBA5Q9GZZ9 404 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 LSG1Q9H089 658 aaKnown RBP22.5■■□□□ 1.19
LIMD2-209ENST00000580222 FAM86C1Q9NVL1 165 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 MYO15AQ9UKN7 3530 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 EMSYQ7Z589 1322 aa22.5■■□□□ 1.19
LIMD2-209ENST00000580222 TMEM221A6NGB7 291 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 M0R296 226 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 REC8O95072 547 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 HOXD8P13378 290 aaPredicted RBP22.49■■□□□ 1.19
LIMD2-209ENST00000580222 PTPN5P54829 565 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 STXBP2Q15833 593 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 RRP12Q5JTH9 1297 aaKnown RBP22.49■■□□□ 1.19
LIMD2-209ENST00000580222 TRIM67Q6ZTA4 783 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 NSUN6Q8TEA1 469 aaKnown RBP22.49■■□□□ 1.19
LIMD2-209ENST00000580222 PBXIP1Q96AQ6 731 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 RMDN3Q96TC7 470 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 KATNAL1Q9BW62 490 aa22.49■■□□□ 1.19
LIMD2-209ENST00000580222 U3KPZ7 1027 aaPredicted RBP22.49■■□□□ 1.19
LIMD2-209ENST00000580222 RGS20O76081 388 aa22.48■■□□□ 1.19
LIMD2-209ENST00000580222 CSPG5O95196 566 aa22.48■■□□□ 1.19
LIMD2-209ENST00000580222 LAMC2Q13753 1193 aa22.48■■□□□ 1.19
LIMD2-209ENST00000580222 DHX37Q8IY37 1157 aaKnown RBP22.48■■□□□ 1.19
LIMD2-209ENST00000580222 IGFLR1Q9H665 355 aa22.48■■□□□ 1.19
LIMD2-209ENST00000580222 TCP11L1Q9NUJ3 509 aa22.48■■□□□ 1.19
LIMD2-209ENST00000580222 PNMA2Q9UL42 364 aa22.48■■□□□ 1.19
LIMD2-209ENST00000580222 STXBP3O00186 592 aa22.47■■□□□ 1.19
LIMD2-209ENST00000580222 EIF2AK2P19525 551 aaKnown RBP22.47■■□□□ 1.19
LIMD2-209ENST00000580222 HSDL1Q3SXM5 330 aa22.47■■□□□ 1.19
LIMD2-209ENST00000580222 C8orf34Q49A92 452 aa22.47■■□□□ 1.19
LIMD2-209ENST00000580222 SEPT8Q92599 483 aa22.47■■□□□ 1.19
LIMD2-209ENST00000580222 C16orf70Q9BSU1 422 aa22.47■■□□□ 1.19
LIMD2-209ENST00000580222 IFIH1Q9BYX4 1025 aaKnown RBP22.47■■□□□ 1.19
LIMD2-209ENST00000580222 TOMM22Q9NS69 142 aa22.47■■□□□ 1.19
LIMD2-209ENST00000580222 RBM8AQ9Y5S9 174 aaKnown RBP22.47■■□□□ 1.19
LIMD2-209ENST00000580222 TREHO43280 583 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 EIF5BO60841 1220 aaKnown RBP22.46■■□□□ 1.19
LIMD2-209ENST00000580222 CTSHP09668 335 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 CTNNB1P35222 781 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 HAND2P61296 217 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 SP2Q02086 613 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 SMAD4Q13485 552 aaKnown RBP22.46■■□□□ 1.19
LIMD2-209ENST00000580222 CAMK1Q14012 370 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 IMMTQ16891 758 aaKnown RBP22.46■■□□□ 1.19
LIMD2-209ENST00000580222 MYSM1Q5VVJ2 828 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 MAP4K1Q92918 833 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 IWS1Q96ST2 819 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 POP1Q99575 1024 aaKnown RBP22.46■■□□□ 1.19
LIMD2-209ENST00000580222 BCAS3Q9H6U6 928 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 MRVI1Q9Y6F6 885 aa22.46■■□□□ 1.19
LIMD2-209ENST00000580222 SPTBN4Q9H254 2564 aa22.45■■□□□ 1.19
LIMD2-209ENST00000580222 MICAL3Q7RTP6 2002 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 ZDBF2Q9HCK1 2354 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 C5orf67F2Z3F1 127 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 ZNF213O14771 459 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 NCK2O43639 380 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 PPFIA4O75335 1185 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 EIF3JO75822 258 aaKnown RBP22.45■■□□□ 1.18
LIMD2-209ENST00000580222 NR3C2P08235 984 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 HOXC8P31273 242 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 BMPR1AP36894 532 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 ADAM15Q13444 863 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 IL17RAQ96F46 866 aa22.45■■□□□ 1.18
LIMD2-209ENST00000580222 DMDP11532 3685 aa22.44■■□□□ 1.18
LIMD2-209ENST00000580222 GFRA3O60609 400 aa22.44■■□□□ 1.18
LIMD2-209ENST00000580222 CACNA1HO95180 2353 aa22.44■■□□□ 1.18
LIMD2-209ENST00000580222 VCPP55072 806 aaKnown RBP22.44■■□□□ 1.18
LIMD2-209ENST00000580222 FIBCD1Q8N539 461 aa22.44■■□□□ 1.18
LIMD2-209ENST00000580222 ATP6V0A1Q93050 837 aa22.44■■□□□ 1.18
LIMD2-209ENST00000580222 MSLNLQ96KJ4 702 aa22.44■■□□□ 1.18
LIMD2-209ENST00000580222 CD207Q9UJ71 328 aa22.44■■□□□ 1.18
LIMD2-209ENST00000580222 COL4A6Q14031 1691 aa22.43■■□□□ 1.18
LIMD2-209ENST00000580222 ZXDAP98168 799 aa22.43■■□□□ 1.18
LIMD2-209ENST00000580222 CDC37Q16543 378 aaPredicted RBP22.43■■□□□ 1.18
LIMD2-209ENST00000580222 CELF3Q5SZQ8 465 aaKnown RBP22.43■■□□□ 1.18
LIMD2-209ENST00000580222 ARHGEF16Q5VV41 709 aa22.43■■□□□ 1.18
LIMD2-209ENST00000580222 GPKOWQ92917 476 aaPredicted RBP eCLIP22.43■■□□□ 1.18
LIMD2-209ENST00000580222 ZFP91Q96JP5 570 aaPredicted RBP22.43■■□□□ 1.18
LIMD2-209ENST00000580222 SPATA33Q96N06 139 aa22.43■■□□□ 1.18
LIMD2-209ENST00000580222 PXMP2Q9NR77 195 aa22.43■■□□□ 1.18
LIMD2-209ENST00000580222 CLEC1BQ9P126 229 aa22.43■■□□□ 1.18
LIMD2-209ENST00000580222 C17orf102A2RUQ5 167 aa22.42■■□□□ 1.18
LIMD2-209ENST00000580222 OPLAHO14841 1288 aa22.42■■□□□ 1.18
LIMD2-209ENST00000580222 FBXL6Q8N531 539 aa22.42■■□□□ 1.18
LIMD2-209ENST00000580222 RNPEPQ9H4A4 650 aa22.42■■□□□ 1.18
LIMD2-209ENST00000580222 RC3H2Q9HBD1 1191 aaKnown RBP22.42■■□□□ 1.18
LIMD2-209ENST00000580222 ABCB11O95342 1321 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 LOC730098B7Z3J9 87 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 EYA4O95677 639 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 GGPS1O95749 300 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 RB1P06400 928 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 SMIM10L2AP0DMW4 78 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 SMIM10L2BP0DMW5 78 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 DNAJB1P25685 340 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 TBC1D10CQ8IV04 446 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 ADGRF4Q8IZF3 695 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 LMAN2LQ9H0V9 348 aa22.41■■□□□ 1.18
LIMD2-209ENST00000580222 EPB41L2O43491 1005 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms