RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 APBB2Q92870 758 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 ATP6V0A1Q93050 837 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 TUT1Q9H6E5 874 aaKnown RBP15.43■□□□□ 0.06
TRAF4-214ENST00000580073 SEC63Q9UGP8 760 aaKnown RBP15.43■□□□□ 0.06
TRAF4-214ENST00000580073 ATG2AQ2TAZ0 1938 aa15.43■□□□□ 0.06
TRAF4-214ENST00000580073 LINC01553A4QN01 128 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 FIBPO43427 364 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 LGALS2P05162 132 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 KIF5BP33176 963 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 TIGD5Q53EQ6 642 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 XRRA1Q6P2D8 792 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 FCHSD1Q86WN1 690 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 MYOCDQ8IZQ8 938 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-214ENST00000580073 CTCFLQ8NI51 663 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-214ENST00000580073 LOXHD1Q8IVV2 1947 aa15.42■□□□□ 0.06
TRAF4-214ENST00000580073 LCHNA4D1U4 455 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 LPXNO60711 386 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 PPP1R11O60927 126 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-214ENST00000580073 RGS20O76081 388 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 ARHGEF15O94989 841 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 RPLP2P05387 115 aaKnown RBP15.41■□□□□ 0.06
TRAF4-214ENST00000580073 SMIM10L2AP0DMW4 78 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 SMIM10L2BP0DMW5 78 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 ICAM3P32942 547 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 GPNMBQ14956 572 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 PLEKHG4Q58EX7 1191 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 CYB5R4Q7L1T6 521 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 SMARCC2Q8TAQ2 1214 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 MAP4K1Q92918 833 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 FAM122AQ96E09 287 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 NECAB3Q96P71 396 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-214ENST00000580073 PIGSQ96S52 555 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 MAP3K14Q99558 947 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 C16orf70Q9BSU1 422 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 MTA3Q9BTC8 594 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 MTUS1Q9ULD2 1270 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 XIRP2A4UGR9 3374 aa15.41■□□□□ 0.06
TRAF4-214ENST00000580073 DDAH1O94760 285 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 HOXC8P31273 242 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 PLA2G5P39877 138 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 GNAQP50148 359 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 COL9A3Q14050 684 aaPredicted RBP15.4■□□□□ 0.06
TRAF4-214ENST00000580073 PUS10Q3MIT2 529 aaKnown RBP15.4■□□□□ 0.06
TRAF4-214ENST00000580073 KRT40Q6A162 431 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 TRAF7Q6Q0C0 670 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 CASC1Q6TDU7 716 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 NLRX1Q86UT6 975 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 IL31RAQ8NI17 732 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 RRP36Q96EU6 259 aaKnown RBP15.4■□□□□ 0.06
TRAF4-214ENST00000580073 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
TRAF4-214ENST00000580073 YME1L1Q96TA2 773 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 LZTS2Q9BRK4 669 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 SUGCTQ9HAC7 445 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 FAM50BQ9Y247 325 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 BDP1A6H8Y1 2624 aa15.4■□□□□ 0.06
TRAF4-214ENST00000580073 KIAA1671Q9BY89 1806 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 CYP21A2P08686 494 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 HTRA4P83105 476 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-214ENST00000580073 TROAPQ12815 778 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 FAM117BQ6P1L5 589 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 RSPH3Q86UC2 560 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 DBF4BQ8NFT6 615 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-214ENST00000580073 SENP7Q9BQF6 1050 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 SPZ1Q9BXG8 430 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 UBE2ZQ9H832 354 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-214ENST00000580073 RWDD3Q9Y3V2 267 aa15.39■□□□□ 0.05
TRAF4-214ENST00000580073 ARIH1Q9Y4X5 557 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-214ENST00000580073 RBM8AQ9Y5S9 174 aaKnown RBP15.39■□□□□ 0.05
TRAF4-214ENST00000580073 PIK3CDO00329 1044 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 SORBS3O60504 671 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 SMARCA1P28370 1054 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 ZNF200P98182 395 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-214ENST00000580073 MBTPS1Q14703 1052 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 TMEM31Q5JXX7 168 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 PCNX4Q63HM2 1172 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 TAF2Q6P1X5 1199 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 TMCO2Q7Z6W1 182 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-214ENST00000580073 WNT8BQ93098 351 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 MRPL38Q96DV4 380 aaKnown RBP15.38■□□□□ 0.05
TRAF4-214ENST00000580073 EHMT1Q9H9B1 1298 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 NRCAMQ92823 1304 aa15.38■□□□□ 0.05
TRAF4-214ENST00000580073 SPATA31C2B4DYI2 1134 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 E7EWF7 191 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 TREHO43280 583 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 CYTH3O43739 400 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 CALM1P0DP23 149 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 CALM2P0DP24 149 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 CALM3P0DP25 149 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 SP2Q02086 613 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 NECTIN1Q15223 517 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 LEXMQ3ZCV2 418 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 CYFIP1Q7L576 1253 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 TMTC2Q8N394 836 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 TNPO1Q92973 898 aaKnown RBP15.37■□□□□ 0.05
TRAF4-214ENST00000580073 GPR20Q99678 358 aa15.37■□□□□ 0.05
TRAF4-214ENST00000580073 ANO2Q9NQ90 1003 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms