RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 TXKP42681 527 aa17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 TNFAIP2Q03169 654 aa17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 NEDD9Q14511 834 aa17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 SLC9C1Q4G0N8 1177 aa17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 DUSP28Q4G0W2 176 aa17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 LRCH2Q5VUJ6 765 aa17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 ARL6IP4Q66PJ3 421 aaKnown RBP17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 GIMAP8Q8ND71 665 aaPredicted RBP17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 TBC1D22BQ9NU19 505 aa17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 WDR81Q562E7 1941 aa17.97■□□□□ 0.47
CSNK1D-212ENST00000580061 NKRFO15226 690 aaKnown RBP eCLIP17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 SPTLC2O15270 562 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 SEPT4O43236 478 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 PPP6R2O75170 966 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 GGPS1O95749 300 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 IL17AQ16552 155 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 GJC2Q5T442 439 aaPredicted RBP17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 CLEC17AQ6ZS10 378 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 LEO1Q8WVC0 666 aaPredicted RBP17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 COPS5Q92905 334 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 TEKT3Q9BXF9 490 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 SCAND2PQ9GZW5 306 aaPredicted RBP17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 BCAS3Q9H6U6 928 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 TTC12Q9H892 705 aaPredicted RBP17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 PCDHA12Q9UN75 941 aa17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 GNEQ9Y223 722 aaKnown RBP17.96■□□□□ 0.47
CSNK1D-212ENST00000580061 GAS7O60861 476 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 FARP2O94887 1054 aaPredicted RBP17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 PTGS1P23219 599 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 MARCKSP29966 332 aaPredicted RBP17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 CNGA1P29973 690 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 ARHGAP1Q07960 439 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 CELF3Q5SZQ8 465 aaKnown RBP17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 B3GNT9Q6UX72 402 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 DTHD1Q6ZMT9 781 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 CYFIP1Q7L576 1253 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 KCNG4Q8TDN1 519 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 SPATA32Q96LK8 384 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 HMX1Q9NP08 348 aaPredicted RBP17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 FBXO2Q9UK22 296 aaPredicted RBP17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 VAV3Q9UKW4 847 aa17.95■□□□□ 0.46
CSNK1D-212ENST00000580061 DDX39AO00148 427 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 GH1P01241 217 aa17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 TECP42680 631 aa17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 FXR2P51116 673 aaKnown RBP eCLIP17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 SPIRE1Q08AE8 756 aa17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 PPP2R5CQ13362 524 aa17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 METTL7BQ6UX53 244 aa17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 DHX37Q8IY37 1157 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 EMID1Q96A84 441 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 FERMT2Q96AC1 680 aa17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 LENG1Q96BZ8 264 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 MLXIPQ9HAP2 919 aa17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 GDPD2Q9HCC8 539 aa17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 JPH1Q9HDC5 661 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 SRPRBQ9Y5M8 271 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-212ENST00000580061 VWA3AA6NCI4 1184 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 SORBS3O60504 671 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 DUSP11O75319 330 aaKnown RBP17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 KRT76Q01546 638 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 GRIN1Q05586 938 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 LAMC2Q13753 1193 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 TMEM266Q2M3C6 531 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 IGSF22Q8N9C0 903 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 UNC45AQ9H3U1 944 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 SLC9A2Q9UBY0 812 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 DDX20Q9UHI6 824 aaKnown RBP17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 Q9Y3F1 56 aa17.93■□□□□ 0.46
CSNK1D-212ENST00000580061 POTEFA5A3E0 1075 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 CCNE2O96020 404 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 PDIA5Q14554 519 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 HSDL1Q3SXM5 330 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 ZNF746Q6NUN9 644 aaPredicted RBP17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 TLK2Q86UE8 772 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 KRI1Q8N9T8 703 aaKnown RBP17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 OR6J1Q8NGC5 347 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 ARMC5Q96C12 935 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.92■□□□□ 0.462e-10■■■□□ 18
CSNK1D-212ENST00000580061 TCEAL9Q9UHQ7 104 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 TELO2Q9Y4R8 837 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 ELP1O95163 1332 aa17.92■□□□□ 0.46
CSNK1D-212ENST00000580061 POTEMA6NI47 508 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 DYNC1LI2O43237 492 aaPredicted RBP17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 CHMP2AO43633 222 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 MSCO60682 206 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 RARBP10826 455 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 LONP1P36776 959 aaKnown RBP17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 ME1P48163 572 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 ACTR2P61160 394 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 SP4Q02446 784 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 MTFR1Q15390 333 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 NCAPH2Q6IBW4 605 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 ZNF333Q96JL9 665 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 SPATA33Q96N06 139 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 CLIC6Q96NY7 704 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 GBP4Q96PP9 640 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 RAB34Q9BZG1 259 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 UNC93B1Q9H1C4 597 aa17.91■□□□□ 0.46
CSNK1D-212ENST00000580061 PCDHA7Q9UN72 937 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms