RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ARHGAP4P98171 946 aa27.31■■□□□ 1.96
LIMD2-207ENST00000579329 KAT2BQ92831 832 aa27.31■■□□□ 1.96
LIMD2-207ENST00000579329 GTF3C6Q969F1 213 aa27.31■■□□□ 1.96
LIMD2-207ENST00000579329 BCAS3Q9H6U6 928 aa27.31■■□□□ 1.96
LIMD2-207ENST00000579329 ADAMTS3O15072 1205 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 B4GALT4O60513 344 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 F2P00734 622 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 ZNF286BP0CG31 522 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 KCNA2P16389 499 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 ITGB8P26012 769 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 CHMP4BP1P59074 171 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 NECAB1Q8N987 351 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 KIF2CQ99661 725 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 TRPV6Q9H1D0 765 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 MTMR10Q9NXD2 777 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 STXBP5LQ9Y2K9 1186 aa27.3■■□□□ 1.96
LIMD2-207ENST00000579329 TIMP1P01033 207 aa27.29■■□□□ 1.96
LIMD2-207ENST00000579329 SUPT20HL2P0C7V6 817 aa27.29■■□□□ 1.96
LIMD2-207ENST00000579329 ZNF76P36508 570 aa27.29■■□□□ 1.96
LIMD2-207ENST00000579329 PSEN2P49810 448 aa27.29■■□□□ 1.96
LIMD2-207ENST00000579329 CEP55Q53EZ4 464 aa27.29■■□□□ 1.96
LIMD2-207ENST00000579329 RASGRP4Q8TDF6 673 aa27.29■■□□□ 1.96
LIMD2-207ENST00000579329 PCDHA4Q9UN74 947 aa27.29■■□□□ 1.96
LIMD2-207ENST00000579329 UNC80Q8N2C7 3258 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 DNAH12Q6ZR08 3092 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 ATP9AO75110 1047 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 CTDNEP1O95476 244 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 CYP3A4P08684 503 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 MFSD10Q14728 455 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 CRYGNQ8WXF5 182 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 AIFM3Q96NN9 605 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 GPR20Q99678 358 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 KCNH7Q9NS40 1196 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 PKD2L1Q9P0L9 805 aa27.28■■□□□ 1.96
LIMD2-207ENST00000579329 HAS3O00219 553 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 GALNT17Q6IS24 598 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 NIPA1Q7RTP0 329 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 SESTD1Q86VW0 696 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 DAGLBQ8NCG7 672 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 CYP2W1Q8TAV3 490 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 PPP1R13LQ8WUF5 828 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 WASF1Q92558 559 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 PPP1R12CQ9BZL4 782 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 TRMT13Q9NUP7 481 aaKnown RBP27.27■■□□□ 1.96
LIMD2-207ENST00000579329 ORC3Q9UBD5 711 aaPredicted RBP27.27■■□□□ 1.96
LIMD2-207ENST00000579329 LIMCH1Q9UPQ0 1083 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 DOCK5Q9H7D0 1870 aa27.27■■□□□ 1.96
LIMD2-207ENST00000579329 MEIS1O00470 390 aa27.26■■□□□ 1.95
LIMD2-207ENST00000579329 LGALS2P05162 132 aa27.26■■□□□ 1.95
LIMD2-207ENST00000579329 XBP1P17861 261 aa27.26■■□□□ 1.95
LIMD2-207ENST00000579329 SP4Q02446 784 aa27.26■■□□□ 1.95
LIMD2-207ENST00000579329 KIAA0753Q2KHM9 967 aa27.26■■□□□ 1.95
LIMD2-207ENST00000579329 ALG1Q9BT22 464 aa27.26■■□□□ 1.95
LIMD2-207ENST00000579329 HIPK3Q9H422 1215 aa27.26■■□□□ 1.95
LIMD2-207ENST00000579329 FPGSQ05932 587 aa27.25■■□□□ 1.95
LIMD2-207ENST00000579329 BLIDQ8IZY5 108 aa27.25■■□□□ 1.95
LIMD2-207ENST00000579329 C7orf31Q8N865 590 aa27.25■■□□□ 1.95
LIMD2-207ENST00000579329 C16orf70Q9BSU1 422 aa27.25■■□□□ 1.95
LIMD2-207ENST00000579329 GTF3C3Q9Y5Q9 886 aa27.25■■□□□ 1.95
LIMD2-207ENST00000579329 NFASCO94856 1347 aa27.24■■□□□ 1.95
LIMD2-207ENST00000579329 ARP10275 920 aa27.24■■□□□ 1.95
LIMD2-207ENST00000579329 RABEP1Q15276 862 aa27.24■■□□□ 1.95
LIMD2-207ENST00000579329 MFSD5Q6N075 450 aa27.24■■□□□ 1.95
LIMD2-207ENST00000579329 PLA2G4DQ86XP0 818 aa27.24■■□□□ 1.95
LIMD2-207ENST00000579329 NSUN7Q8NE18 718 aaKnown RBP27.24■■□□□ 1.95
LIMD2-207ENST00000579329 SDF4Q9BRK5 362 aa27.24■■□□□ 1.95
LIMD2-207ENST00000579329 NOC4LQ9BVI4 516 aaKnown RBP27.24■■□□□ 1.95
LIMD2-207ENST00000579329 AGO4Q9HCK5 861 aaKnown RBP27.24■■□□□ 1.95
LIMD2-207ENST00000579329 NOD1Q9Y239 953 aa27.24■■□□□ 1.95
LIMD2-207ENST00000579329 FAM86B1E9PN63 330 aa27.23■■□□□ 1.95
LIMD2-207ENST00000579329 FAM86B2P0C5J1 330 aa27.23■■□□□ 1.95
LIMD2-207ENST00000579329 SETQ01105 290 aaPredicted RBP27.23■■□□□ 1.95
LIMD2-207ENST00000579329 TMEM199Q8N511 208 aa27.23■■□□□ 1.95
LIMD2-207ENST00000579329 PHF20Q9BVI0 1012 aa27.23■■□□□ 1.95
LIMD2-207ENST00000579329 JPH1Q9HDC5 661 aaPredicted RBP27.23■■□□□ 1.95
LIMD2-207ENST00000579329 HDAC6Q9UBN7 1215 aa27.23■■□□□ 1.95
LIMD2-207ENST00000579329 GTF2IRD1Q9UHL9 959 aa27.23■■□□□ 1.95
LIMD2-207ENST00000579329 ZNF215Q9UL58 517 aaPredicted RBP27.23■■□□□ 1.95
LIMD2-207ENST00000579329 KCNJ14Q9UNX9 436 aa27.23■■□□□ 1.95
LIMD2-207ENST00000579329 TELO2Q9Y4R8 837 aa27.23■■□□□ 1.95
LIMD2-207ENST00000579329 LAMA2P24043 3122 aaKnown RBP27.23■■□□□ 1.95
LIMD2-207ENST00000579329 IGLV3-22A0A075B6J6 115 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 H3BRB1 525 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 DTNBO60941 627 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 CYP2C9P11712 490 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 CYP2C18P33260 490 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 NPY5RQ15761 445 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 PTGISQ16647 500 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 UTP14CQ5TAP6 766 aaKnown RBP27.22■■□□□ 1.95
LIMD2-207ENST00000579329 SEPT1Q8WYJ6 367 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 ZSCAN31Q96LW9 406 aaPredicted RBP27.22■■□□□ 1.95
LIMD2-207ENST00000579329 TUT1Q9H6E5 874 aaKnown RBP27.22■■□□□ 1.95
LIMD2-207ENST00000579329 SLC9A2Q9UBY0 812 aa27.22■■□□□ 1.95
LIMD2-207ENST00000579329 FDPSP14324 419 aaKnown RBP27.21■■□□□ 1.95
LIMD2-207ENST00000579329 CIITAP33076 1130 aa27.21■■□□□ 1.95
LIMD2-207ENST00000579329 TCF7P36402 384 aaPredicted RBP27.21■■□□□ 1.95
LIMD2-207ENST00000579329 ST3GAL1Q11201 340 aa27.21■■□□□ 1.95
LIMD2-207ENST00000579329 PPIGQ13427 754 aaKnown RBP eCLIP27.21■■□□□ 1.95
LIMD2-207ENST00000579329 GDF6Q6KF10 455 aaPredicted RBP27.21■■□□□ 1.95
LIMD2-207ENST00000579329 M0R2N6 131 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms