RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 A0A087X0B3 334 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 ACTN4O43707 911 aaKnown RBP11.13□□□□□ -0.63
RTTN-202ENST00000578780 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
RTTN-202ENST00000578780 NAA25Q14CX7 972 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 DPCR1Q3MIW9 517 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 SYDE2Q5VT97 1194 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
RTTN-202ENST00000578780 CUL5Q93034 780 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 TEPSINQ96N21 525 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
RTTN-202ENST00000578780 TMEM60Q9H2L4 133 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 RABEP2Q9H5N1 569 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 PSTPIP2Q9H939 334 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 HACL1Q9UJ83 578 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 PCDHA1Q9Y5I3 950 aa11.13□□□□□ -0.63
RTTN-202ENST00000578780 ARFGEF1Q9Y6D6 1849 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 LONP1P36776 959 aaKnown RBP11.12□□□□□ -0.63
RTTN-202ENST00000578780 PEX19P40855 299 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 SNAP25P60880 206 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 KCNB1Q14721 858 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 POSTNQ15063 836 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 UBE2SQ16763 222 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 KIAA1755Q5JYT7 1200 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 CEP85LQ5SZL2 805 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 KANK3Q6NY19 840 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 FAM228AQ86W67 206 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 MAB21L3Q8N8X9 362 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 BCAS4Q8TDM0 211 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 SPDL1Q96EA4 605 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 GOPCQ9HD26 462 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 SAMM50Q9Y512 469 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 PCDHA5Q9Y5H7 936 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 ATXN2Q99700 1313 aaKnown RBP11.12□□□□□ -0.63
RTTN-202ENST00000578780 ENO4A6NNW6 628 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 H7C1D1 291 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 LAD1O00515 517 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 PYGLP06737 847 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 SMTNP53814 917 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 PDCD2Q16342 344 aaPredicted RBP11.12□□□□□ -0.63
RTTN-202ENST00000578780 CEP57Q86XR8 500 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 GRAMD1CQ8IYS0 662 aa11.12□□□□□ -0.63
RTTN-202ENST00000578780 RPUSD2Q8IZ73 545 aaKnown RBP11.12□□□□□ -0.63
RTTN-202ENST00000578780 FHDC1Q9C0D6 1143 aaPredicted RBP11.12□□□□□ -0.63
RTTN-202ENST00000578780 PUF60Q9UHX1 559 aaKnown RBP11.12□□□□□ -0.63
RTTN-202ENST00000578780 PHF20L1A8MW92 1017 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 ZSCAN12O43309 604 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 ASNSP08243 561 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 LMNB1P20700 586 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 PRPHP41219 470 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 CLK2P49760 499 aaKnown RBP11.11□□□□□ -0.63
RTTN-202ENST00000578780 SLC8A3P57103 927 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
RTTN-202ENST00000578780 BTNL9Q6UXG8 535 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 LMBR1Q8WVP7 490 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 SAAL1Q96ER3 474 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 AMNQ9BXJ7 453 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 DEFB129Q9H1M3 183 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
RTTN-202ENST00000578780 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.11□□□□□ -0.63
RTTN-202ENST00000578780 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
RTTN-202ENST00000578780 PPFIA2O75334 1257 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 OR52Z1P0C646 297 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 CDC25AP30304 524 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 STAT2P52630 851 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 FAM83BQ5T0W9 1011 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 CCDC84Q86UT8 332 aaPredicted RBP11.1□□□□□ -0.63
RTTN-202ENST00000578780 FCHSD1Q86WN1 690 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 FBXO11Q86XK2 927 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 RIN2Q8WYP3 895 aaPredicted RBP11.1□□□□□ -0.63
RTTN-202ENST00000578780 SH2D4AQ9H788 454 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 VCPKMTQ9H867 229 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 ATP6V0A4Q9HBG4 840 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 GRIN2DO15399 1336 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 MEFVO15553 781 aaPredicted RBP11.1□□□□□ -0.63
RTTN-202ENST00000578780 AFMP43652 599 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 ORC2Q13416 577 aaPredicted RBP11.1□□□□□ -0.63
RTTN-202ENST00000578780 USH1GQ495M9 461 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 PAGE5Q96GU1 130 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 BPIFA3Q9BQP9 254 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 PYM1Q9BRP8 204 aaKnown RBP11.1□□□□□ -0.63
RTTN-202ENST00000578780 GLIS2Q9BZE0 524 aaPredicted RBP11.1□□□□□ -0.63
RTTN-202ENST00000578780 GLT8D2Q9H1C3 349 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 VIPAS39Q9H9C1 493 aa11.1□□□□□ -0.63
RTTN-202ENST00000578780 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 EIF3HO15372 352 aaKnown RBP eCLIP11.09□□□□□ -0.63
RTTN-202ENST00000578780 MAFGO15525 162 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 ECEL1O95672 775 aa11.09□□□□□ -0.63
RTTN-202ENST00000578780 RHOXF2BP0C7M4 288 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms