RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 INF2Q27J81 1249 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 LETM2Q2VYF4 491 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 PRR16Q569H4 304 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 CXCL17Q6UXB2 119 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 AGO4Q9HCK5 861 aaKnown RBP13.09□□□□□ -0.31
ERBB2-208ENST00000578630 TBC1D22BQ9NU19 505 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 TCEAL9Q9UHQ7 104 aa13.09□□□□□ -0.31
ERBB2-208ENST00000578630 RBBP6Q7Z6E9 1792 aaKnown RBP13.09□□□□□ -0.31
ERBB2-208ENST00000578630 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
ERBB2-208ENST00000578630 MARCH6O60337 910 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 EVI5O60447 810 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 SORBS3O60504 671 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 MMP3P08254 477 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 GCFC2P16383 781 aaKnown RBP13.08□□□□□ -0.32
ERBB2-208ENST00000578630 PDCP20941 246 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 PURAQ00577 322 aaKnown RBP13.08□□□□□ -0.32
ERBB2-208ENST00000578630 HSDL1Q3SXM5 330 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 Q4G0T1 1027 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 C1orf53Q5VUE5 145 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 PPP4R3AQ6IN85 833 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 SEPT1Q8WYJ6 367 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 PKD2L1Q9P0L9 805 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 SLC9A2Q9UBY0 812 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 NR2E3Q9Y5X4 410 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 NFASCO94856 1347 aa13.08□□□□□ -0.32
ERBB2-208ENST00000578630 IGLV3-22A0A075B6J6 115 aa13.07□□□□□ -0.32
ERBB2-208ENST00000578630 A0A0U1RQG5 324 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-208ENST00000578630 ARVCFO00192 962 aa13.07□□□□□ -0.32
ERBB2-208ENST00000578630 CCNT1O60563 726 aaKnown RBP13.07□□□□□ -0.32
ERBB2-208ENST00000578630 BAG4O95429 457 aaKnown RBP13.07□□□□□ -0.32
ERBB2-208ENST00000578630 ITGA7Q13683 1181 aa13.07□□□□□ -0.32
ERBB2-208ENST00000578630 MCTP1Q6DN14 999 aa13.07□□□□□ -0.32
ERBB2-208ENST00000578630 TNFRSF25Q93038 417 aa13.07□□□□□ -0.32
ERBB2-208ENST00000578630 GPR20Q99678 358 aa13.07□□□□□ -0.32
ERBB2-208ENST00000578630 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
ERBB2-208ENST00000578630 JPH1Q9HDC5 661 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-208ENST00000578630 DDX25Q9UHL0 483 aaKnown RBP13.07□□□□□ -0.32
ERBB2-208ENST00000578630 MROH7Q68CQ1 1323 aa13.07□□□□□ -0.32
ERBB2-208ENST00000578630 EDIL3O43854 480 aa13.06□□□□□ -0.32
ERBB2-208ENST00000578630 SP4Q02446 784 aa13.06□□□□□ -0.32
ERBB2-208ENST00000578630 LRRC26Q2I0M4 334 aa13.06□□□□□ -0.32
ERBB2-208ENST00000578630 TNPO1Q92973 898 aaKnown RBP13.06□□□□□ -0.32
ERBB2-208ENST00000578630 RIT2Q99578 217 aa13.06□□□□□ -0.32
ERBB2-208ENST00000578630 BCAS3Q9H6U6 928 aa13.06□□□□□ -0.32
ERBB2-208ENST00000578630 NOL7Q9UMY1 257 aaKnown RBP13.06□□□□□ -0.32
ERBB2-208ENST00000578630 KIAA1217Q5T5P2 1943 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 DCDC2CA8MYV0 355 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 TLR3O15455 904 aaKnown RBP13.05□□□□□ -0.32
ERBB2-208ENST00000578630 MSH4O15457 936 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 TDP2O95551 362 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
ERBB2-208ENST00000578630 PDIA4P13667 645 aaKnown RBP13.05□□□□□ -0.32
ERBB2-208ENST00000578630 U2AF2P26368 475 aaKnown RBP eCLIP13.05□□□□□ -0.32
ERBB2-208ENST00000578630 TRAPPC10P48553 1259 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 CDK7P50613 346 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 RTP1P59025 263 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 CHMP4BP1P59074 171 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 KRT76Q01546 638 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 BECN1Q14457 450 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 SNX17Q15036 470 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 EARS2Q5JPH6 523 aaKnown RBP13.05□□□□□ -0.32
ERBB2-208ENST00000578630 UTP14CQ5TAP6 766 aaKnown RBP13.05□□□□□ -0.32
ERBB2-208ENST00000578630 NFRKBQ6P4R8 1299 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 NOSTRINQ8IVI9 506 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 MBOAT7Q96N66 472 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 TOX2Q96NM4 488 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 SMARCAD1Q9H4L7 1026 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 AZI2Q9H6S1 392 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 PRKAG2Q9UGJ0 569 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 ZNF215Q9UL58 517 aaPredicted RBP13.05□□□□□ -0.32
ERBB2-208ENST00000578630 ATP11BQ9Y2G3 1177 aa13.05□□□□□ -0.32
ERBB2-208ENST00000578630 GSTTP1A0A1W2PQM5 241 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 H3BRB1 525 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 DDX39AO00148 427 aaKnown RBP13.04□□□□□ -0.32
ERBB2-208ENST00000578630 TBX3O15119 743 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 DHX15O43143 795 aaKnown RBP13.04□□□□□ -0.32
ERBB2-208ENST00000578630 GAS7O60861 476 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 SUPT20HL2P0C7V6 817 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 ATP2B1P20020 1258 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 TCF7P36402 384 aaPredicted RBP13.04□□□□□ -0.32
ERBB2-208ENST00000578630 PSEN2P49810 448 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 ACTR2P61160 394 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 PSMC6P62333 389 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 TLE2Q04725 743 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 PTPN11Q06124 597 aaPredicted RBP13.04□□□□□ -0.32
ERBB2-208ENST00000578630 ITGB3BPQ13352 177 aaPredicted RBP13.04□□□□□ -0.32
ERBB2-208ENST00000578630 NBPF20Q3BBV1 942 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 FAM47CQ5HY64 1035 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 ZNF746Q6NUN9 644 aaPredicted RBP13.04□□□□□ -0.32
ERBB2-208ENST00000578630 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 ANKRD33Q7Z3H0 272 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
ERBB2-208ENST00000578630 SLFN12Q8IYM2 578 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 C7orf31Q8N865 590 aa13.04□□□□□ -0.32
ERBB2-208ENST00000578630 SLC43A3Q8NBI5 491 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms