RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 COL6A1P12109 1028 aa14.03□□□□□ -0.16
RARA-208ENST00000577646 ACLYP53396 1101 aa14.03□□□□□ -0.16
RARA-208ENST00000577646 SP2Q02086 613 aa14.03□□□□□ -0.16
RARA-208ENST00000577646 SEMA3FQ13275 785 aa14.03□□□□□ -0.16
RARA-208ENST00000577646 KCNA10Q16322 511 aa14.03□□□□□ -0.16
RARA-208ENST00000577646 RILPL1Q5EBL4 403 aa14.03□□□□□ -0.16
RARA-208ENST00000577646 C1orf53Q5VUE5 145 aa14.03□□□□□ -0.16
RARA-208ENST00000577646 ZNF577Q9BSK1 485 aa14.03□□□□□ -0.16
RARA-208ENST00000577646 DDX25Q9UHL0 483 aaKnown RBP14.03□□□□□ -0.16
RARA-208ENST00000577646 H0YGN5 161 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 NOP56O00567 594 aaKnown RBP14.02□□□□□ -0.17
RARA-208ENST00000577646 EDIL3O43854 480 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 EVI5O60447 810 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 SYT1P21579 422 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 KRT76Q01546 638 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 GUCY1B3Q02153 619 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 LETM2Q2VYF4 491 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 PRR16Q569H4 304 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 GJC2Q5T442 439 aaPredicted RBP14.02□□□□□ -0.17
RARA-208ENST00000577646 ANO1Q5XXA6 986 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 ZNF746Q6NUN9 644 aaPredicted RBP14.02□□□□□ -0.17
RARA-208ENST00000577646 SLFN12Q8IYM2 578 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 CYP2W1Q8TAV3 490 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 SEPT1Q8WYJ6 367 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 SLC5A5Q92911 643 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 TNPO1Q92973 898 aaKnown RBP14.02□□□□□ -0.17
RARA-208ENST00000577646 LENG9Q96B70 501 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 GLT1D1Q96MS3 346 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 SPATA33Q96N06 139 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 ZSCAN16Q9H4T2 348 aaPredicted RBP14.02□□□□□ -0.17
RARA-208ENST00000577646 C11orf49Q9H6J7 331 aa14.02□□□□□ -0.17
RARA-208ENST00000577646 JPH1Q9HDC5 661 aaPredicted RBP14.02□□□□□ -0.17
RARA-208ENST00000577646 CCNT1O60563 726 aaKnown RBP14.01□□□□□ -0.17
RARA-208ENST00000577646 DTNBO60941 627 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 ATP9AO75110 1047 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 ASGR1P07306 291 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 ARP10275 920 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 MNX1P50219 401 aaPredicted RBP14.01□□□□□ -0.17
RARA-208ENST00000577646 MCTP1Q6DN14 999 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 CYFIP1Q7L576 1253 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
RARA-208ENST00000577646 RDM1Q8NG50 284 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 AFG1LQ8WV93 481 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 MTG1Q9BT17 334 aaPredicted RBP14.01□□□□□ -0.17
RARA-208ENST00000577646 KATNAL1Q9BW62 490 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 SLC9A2Q9UBY0 812 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 MYH7BA7E2Y1 1941 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 SZT2Q5T011 3432 aa14.01□□□□□ -0.17
RARA-208ENST00000577646 MROH7Q68CQ1 1323 aa14□□□□□ -0.17
RARA-208ENST00000577646 FRMPD3Q5JV73 1810 aa14□□□□□ -0.17
RARA-208ENST00000577646 LAD1O00515 517 aa14□□□□□ -0.17
RARA-208ENST00000577646 MSH4O15457 936 aa14□□□□□ -0.17
RARA-208ENST00000577646 DHX15O43143 795 aaKnown RBP14□□□□□ -0.17
RARA-208ENST00000577646 STX6O43752 255 aa14□□□□□ -0.17
RARA-208ENST00000577646 ATG7O95352 703 aa14□□□□□ -0.17
RARA-208ENST00000577646 MMP3P08254 477 aa14□□□□□ -0.17
RARA-208ENST00000577646 SFNP31947 248 aa14□□□□□ -0.17
RARA-208ENST00000577646 SLC26A2P50443 739 aa14□□□□□ -0.17
RARA-208ENST00000577646 FXR1P51114 621 aaKnown RBP eCLIP14□□□□□ -0.17
RARA-208ENST00000577646 FOSBP53539 338 aa14□□□□□ -0.17
RARA-208ENST00000577646 PURAQ00577 322 aaKnown RBP14□□□□□ -0.17
RARA-208ENST00000577646 PTPN11Q06124 597 aaPredicted RBP14□□□□□ -0.17
RARA-208ENST00000577646 DIS3LQ8TF46 1054 aaKnown RBP14□□□□□ -0.17
RARA-208ENST00000577646 COPS5Q92905 334 aa14□□□□□ -0.17
RARA-208ENST00000577646 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
RARA-208ENST00000577646 KCNMB3Q9NPA1 279 aa14□□□□□ -0.17
RARA-208ENST00000577646 MARCH6O60337 910 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 GAS7O60861 476 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 TDP2O95551 362 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 BMP15O95972 392 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 JAK3P52333 1124 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 ITGB3BPQ13352 177 aaPredicted RBP13.99□□□□□ -0.17
RARA-208ENST00000577646 HSDL1Q3SXM5 330 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 EARS2Q5JPH6 523 aaKnown RBP13.99□□□□□ -0.17
RARA-208ENST00000577646 TMEM63BQ5T3F8 832 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 LRCH2Q5VUJ6 765 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 ETNPPLQ8TBG4 499 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 LENG1Q96BZ8 264 aaPredicted RBP13.99□□□□□ -0.17
RARA-208ENST00000577646 TOX2Q96NM4 488 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 GPR20Q99678 358 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 TEKT3Q9BXF9 490 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 SENP6Q9GZR1 1112 aaPredicted RBP13.99□□□□□ -0.17
RARA-208ENST00000577646 SMARCAD1Q9H4L7 1026 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 STARD7Q9NQZ5 370 aa13.99□□□□□ -0.17
RARA-208ENST00000577646 ZNF215Q9UL58 517 aaPredicted RBP13.99□□□□□ -0.17
RARA-208ENST00000577646 RANBP2P49792 3224 aaKnown RBP13.98□□□□□ -0.17
RARA-208ENST00000577646 A0A0U1RQG5 324 aaPredicted RBP13.98□□□□□ -0.17
RARA-208ENST00000577646 A0A1W2PQ45 241 aaPredicted RBP13.98□□□□□ -0.17
RARA-208ENST00000577646 A0A1W2PQY0 241 aa13.98□□□□□ -0.17
RARA-208ENST00000577646 VPS37CA5D8V6 355 aaPredicted RBP13.98□□□□□ -0.17
RARA-208ENST00000577646 NEMFO60524 1076 aa13.98□□□□□ -0.17
RARA-208ENST00000577646 PSMD10O75832 226 aa13.98□□□□□ -0.17
RARA-208ENST00000577646 MYCNP04198 464 aaPredicted RBP13.98□□□□□ -0.17
RARA-208ENST00000577646 ANP32AP39687 249 aaKnown RBP13.98□□□□□ -0.17
RARA-208ENST00000577646 BEX3Q00994 111 aa13.98□□□□□ -0.17
RARA-208ENST00000577646 SNX17Q15036 470 aa13.98□□□□□ -0.17
RARA-208ENST00000577646 TTC38Q5R3I4 469 aa13.98□□□□□ -0.17
RARA-208ENST00000577646 MIS18BP1Q6P0N0 1132 aa13.98□□□□□ -0.17
RARA-208ENST00000577646 NFRKBQ6P4R8 1299 aa13.98□□□□□ -0.17
RARA-208ENST00000577646 SLC39A5Q6ZMH5 540 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms