RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 STAT5AP42229 794 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 HTRA3P83110 453 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 PABPC4Q13310 644 aaKnown RBP eCLIP7.83□□□□□ -1.16
NUP88-213ENST00000576862 CR1LQ2VPA4 569 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 CNKSR3Q6P9H4 555 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 C16orf86Q6ZW13 317 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 DACT3Q96B18 629 aaPredicted RBP7.83□□□□□ -1.16
NUP88-213ENST00000576862 PDGFDQ9GZP0 370 aaPredicted RBP7.83□□□□□ -1.16
NUP88-213ENST00000576862 DSEQ9UL01 958 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 COQ6Q9Y2Z9 468 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 CD2APQ9Y5K6 639 aa7.83□□□□□ -1.16
NUP88-213ENST00000576862 TLDC2A0PJX2 215 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 LRG1P02750 347 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 PDE6AP16499 860 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 SDSP20132 328 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 EPHA5P54756 1037 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 TUSC3Q13454 348 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 TCEA2Q15560 299 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 GPR19Q15760 415 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 ZNF385BQ569K4 471 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 OSTM1Q86WC4 334 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 SYNPOQ8N3V7 929 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 DDX11Q96FC9 970 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 NOX5Q96PH1 765 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 CATSPERZQ9NTU4 200 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 DTLQ9NZJ0 730 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 FAN1Q9Y2M0 1017 aa7.82□□□□□ -1.16
NUP88-213ENST00000576862 ZNF561-AS1K7EIQ3 104 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 ENPP3O14638 875 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 NUAK1O60285 661 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 CDC45O75419 566 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 DNM2P50570 870 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 JAM2P57087 298 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 C21orf62-AS1Q17RA5 79 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 CD300LDQ6UXZ3 194 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 ARHGAP36Q6ZRI8 547 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 LRRC56Q8IYG6 542 aaPredicted RBP7.81□□□□□ -1.16
NUP88-213ENST00000576862 TTLL11Q8NHH1 800 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 TOE1Q96GM8 510 aaKnown RBP7.81□□□□□ -1.16
NUP88-213ENST00000576862 TOX2Q96NM4 488 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 CELF4Q9BZC1 486 aaKnown RBP7.81□□□□□ -1.16
NUP88-213ENST00000576862 CD244Q9BZW8 370 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 IRF2BPLQ9H1B7 796 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 SMURF1Q9HCE7 757 aa7.81□□□□□ -1.16
NUP88-213ENST00000576862 RFXAPO00287 272 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 CYP2C8P10632 490 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 JAG1P78504 1218 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 ST5P78524 1137 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 LACTBP83111 547 aaPredicted RBP7.8□□□□□ -1.16
NUP88-213ENST00000576862 GRIN1Q05586 938 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 FAM47CQ5HY64 1035 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 TEPPQ6URK8 271 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 KCTD1Q719H9 257 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 OVCH1Q7RTY7 1134 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 PTRH1Q86Y79 214 aaKnown RBP7.8□□□□□ -1.16
NUP88-213ENST00000576862 TRIM48Q8IWZ4 208 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 FNIP1Q8TF40 1166 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 PWWP2AQ96N64 755 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 GORASP1Q9BQQ3 440 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 SRPK3Q9UPE1 567 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 WASF3Q9UPY6 502 aa7.8□□□□□ -1.16
NUP88-213ENST00000576862 TNPO3Q9Y5L0 923 aaKnown RBP7.8□□□□□ -1.16
NUP88-213ENST00000576862 MAN2B1O00754 1011 aa7.79□□□□□ -1.16
NUP88-213ENST00000576862 ZNF460Q14592 562 aa7.79□□□□□ -1.16
NUP88-213ENST00000576862 CRY1Q16526 586 aa7.79□□□□□ -1.16
NUP88-213ENST00000576862 CIAPIN1Q6FI81 312 aa7.79□□□□□ -1.16
NUP88-213ENST00000576862 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.79□□□□□ -1.16
NUP88-213ENST00000576862 KIAA0907Q7Z7F0 614 aaPredicted RBP7.79□□□□□ -1.16
NUP88-213ENST00000576862 PROSER1Q86XN7 944 aa7.79□□□□□ -1.16
NUP88-213ENST00000576862 CISD2Q8N5K1 135 aaKnown RBP7.79□□□□□ -1.16
NUP88-213ENST00000576862 LINC00482Q8N8I6 264 aa7.79□□□□□ -1.16
NUP88-213ENST00000576862 YIPF4Q9BSR8 244 aa7.79□□□□□ -1.16
NUP88-213ENST00000576862 HSPBP1Q9NZL4 362 aa7.79□□□□□ -1.16
NUP88-213ENST00000576862 ACOT7O00154 380 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 KCNK3O14649 394 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 GSTA4O15217 222 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 ASLP04424 464 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 KRT15P19012 456 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 IGFALSP35858 605 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 AFF3P51826 1226 aaKnown RBP7.78□□□□□ -1.16
NUP88-213ENST00000576862 CAP1Q01518 475 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 DLX2Q07687 328 aaPredicted RBP7.78□□□□□ -1.16
NUP88-213ENST00000576862 VWA3BQ502W6 1294 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 ZC3H18Q86VM9 953 aaKnown RBP7.78□□□□□ -1.16
NUP88-213ENST00000576862 IGSF22Q8N9C0 903 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 RBPJLQ9UBG7 517 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 PMF1-BGLAPU3KQ54 211 aa7.78□□□□□ -1.16
NUP88-213ENST00000576862 FAM83GA6ND36 823 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 FAM90A27PA6NNH2 459 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 FAHP16930 419 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 ITGA1P56199 1179 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 NKX3-2P78367 333 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 PAN2Q504Q3 1202 aaKnown RBP7.77□□□□□ -1.17
NUP88-213ENST00000576862 FSTL4Q6MZW2 842 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 ZCCHC8Q6NZY4 707 aaKnown RBP7.77□□□□□ -1.17
NUP88-213ENST00000576862 LCNL1Q6ZST4 164 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 STK32CQ86UX6 486 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 NINJ1Q92982 152 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 FEZ1Q99689 392 aa7.77□□□□□ -1.17
NUP88-213ENST00000576862 C11orf84Q9BUA3 381 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms