RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 UBE2OQ9C0C9 1292 aaKnown RBP7.44□□□□□ -1.22
NUP88-212ENST00000576708 EPB41L4AQ9HCS5 686 aaPredicted RBP7.44□□□□□ -1.22
NUP88-212ENST00000576708 RANBP2P49792 3224 aaKnown RBP7.44□□□□□ -1.22
NUP88-212ENST00000576708 SZT2Q5T011 3432 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 FRMPD3Q5JV73 1810 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 A0A1W2PPC1 479 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 GPAA1O43292 621 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 STRNO43815 780 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 FZD6O60353 706 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 BMP4P12644 408 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 TAL1P17542 331 aaPredicted RBP7.43□□□□□ -1.22
NUP88-212ENST00000576708 BMP8BP34820 402 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 INSM1Q01101 510 aaPredicted RBP7.43□□□□□ -1.22
NUP88-212ENST00000576708 SBK1Q52WX2 424 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 OLFML2BQ68BL8 750 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 ALKBH2Q6NS38 261 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 MB21D1Q8N884 522 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 REPS2Q8NFH8 660 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 APPBP2Q92624 585 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 FERMT2Q96AC1 680 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 MAML3Q96JK9 1138 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 MMP19Q99542 508 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 MROH8Q9H579 483 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 SH2D4AQ9H788 454 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 KANSL2Q9H9L4 492 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 MKNK2Q9HBH9 465 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 ARPP21Q9UBL0 812 aaPredicted RBP7.43□□□□□ -1.22
NUP88-212ENST00000576708 ADAMTS5Q9UNA0 930 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 POLIQ9UNA4 740 aa7.43□□□□□ -1.22
NUP88-212ENST00000576708 MYH7P12883 1935 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 MYH8P13535 1937 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 F5H6K3 240 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 DNM1LO00429 736 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 VWA5AO00534 786 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 SEPT4O43236 478 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 NDUFB10O96000 172 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 APPP05067 770 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 FCER1AP12319 257 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 EPB42P16452 691 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 STAT3P40763 770 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 ADCYAP1R1P41586 468 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 RTP1P59025 263 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 KLRC3Q07444 240 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 SPEM2Q0P670 501 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 LAMC2Q13753 1193 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 TRIP4Q15650 581 aaPredicted RBP7.42□□□□□ -1.22
NUP88-212ENST00000576708 FAM47AQ5JRC9 791 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 CCDC129Q6ZRS4 1044 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 KRT25Q7Z3Z0 450 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 RIOX2Q8IUF8 465 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 TDHQ8IZJ6 230 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 PI4K2BQ8TCG2 481 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 LENG1Q96BZ8 264 aaPredicted RBP7.42□□□□□ -1.22
NUP88-212ENST00000576708 INCENPQ9NQS7 918 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 CLIP2Q9UDT6 1046 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 ZNF214Q9UL59 606 aaPredicted RBP7.42□□□□□ -1.22
NUP88-212ENST00000576708 PPP1R9AQ9ULJ8 1098 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 ATP11BQ9Y2G3 1177 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 RIPK3Q9Y572 518 aa7.42□□□□□ -1.22
NUP88-212ENST00000576708 COL11A1P12107 1806 aaPredicted RBP7.41□□□□□ -1.22
NUP88-212ENST00000576708 PARP14Q460N5 1801 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 ZNF236Q9UL36 1845 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 IGKV6D-41A0A0C4DH26 115 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 A6NHS1 94 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 MSCO60682 206 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 SASH3O75995 380 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 SLC25A27O95847 323 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 PDGFAP04085 211 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 TDO2P48775 406 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 KCTD2Q14681 263 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 LRRC41Q15345 812 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 ZNF792Q3KQV3 632 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 TRIM60Q495X7 471 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 SLC39A5Q6ZMH5 540 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 IFNL3Q8IZI9 196 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 ABRAQ8N0Z2 381 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 CPXCR1Q8N123 301 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 LRRC47Q8N1G4 583 aaKnown RBP7.41□□□□□ -1.22
NUP88-212ENST00000576708 PIK3R5Q8WYR1 880 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 CEP95Q96GE4 821 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 GPATCH3Q96I76 525 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 SLF1Q9BQI6 1058 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 GSX2Q9BZM3 304 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 NYAP2Q9P242 653 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 PRR12Q9ULL5 1215 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 KCNMB2Q9Y691 235 aa7.41□□□□□ -1.22
NUP88-212ENST00000576708 KBTBD13C9JR72 458 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 FOXP2O15409 715 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 XYLBO75191 536 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 PGK1P00558 417 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 ZFYP08048 801 aaPredicted RBP7.4□□□□□ -1.22
NUP88-212ENST00000576708 ZNF865P0CJ78 1059 aaPredicted RBP7.4□□□□□ -1.22
NUP88-212ENST00000576708 LRIT3Q3SXY7 679 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 C8orf34Q49A92 452 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 SNRNP48Q6IEG0 339 aaKnown RBP7.4□□□□□ -1.22
NUP88-212ENST00000576708 GIMAP6Q6P9H5 292 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 RASGRP2Q7LDG7 609 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 ZNF444Q8N0Y2 327 aaPredicted RBP7.4□□□□□ -1.22
NUP88-212ENST00000576708 DEFB123Q8N688 67 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 ARRDC4Q8NCT1 418 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms