RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 ATOH1Q92858 354 aaPredicted RBP19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 MAF1Q9H063 256 aa19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 ALG13Q9NP73 1137 aaKnown RBP19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 TTC41PQ6P2S7 1318 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 H3BRB1 525 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 CFBP00751 764 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 FGAP02671 866 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 HSPD1P10809 573 aaKnown RBP19■□□□□ 0.63
CTDNEP1-211ENST00000575783 ALX1Q15699 326 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 ADGRF4Q8IZF3 695 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 APBB2Q92870 758 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 RNPEPQ9H4A4 650 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 TUT1Q9H6E5 874 aaKnown RBP19■□□□□ 0.63
CTDNEP1-211ENST00000575783 MLXIPQ9HAP2 919 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 VAT1LQ9HCJ6 419 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 MRPL11Q9Y3B7 192 aaKnown RBP19■□□□□ 0.63
CTDNEP1-211ENST00000575783 RWDD3Q9Y3V2 267 aa19■□□□□ 0.63
CTDNEP1-211ENST00000575783 DHX16O60231 1041 aaKnown RBP18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 RGS20O76081 388 aa18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 LINC00271P0C7V0 271 aa18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 HAND2P61296 217 aa18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 FOXK2Q01167 660 aa18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 SP2Q02086 613 aa18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 MIER1Q8N108 512 aa18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 OTUD7AQ8TE49 926 aaPredicted RBP18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 ZKSCAN3Q9BRR0 538 aa18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 SETD4Q9NVD3 440 aa18.99■□□□□ 0.63
CTDNEP1-211ENST00000575783 MICAL3Q7RTP6 2002 aa18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 CAND2O75155 1236 aa18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 VCPP55072 806 aaKnown RBP18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 BTG3Q14201 252 aaPredicted RBP18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 QRICH1Q2TAL8 776 aa18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 KCNV1Q6PIU1 500 aa18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 ZFP91Q96JP5 570 aaPredicted RBP18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 MSLNLQ96KJ4 702 aa18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 ADGRA3Q8IWK6 1321 aa18.98■□□□□ 0.63
CTDNEP1-211ENST00000575783 LOC730098B7Z3J9 87 aa18.97■□□□□ 0.63
CTDNEP1-211ENST00000575783 EYA4O95677 639 aa18.97■□□□□ 0.63
CTDNEP1-211ENST00000575783 MMP1P03956 469 aa18.97■□□□□ 0.63
CTDNEP1-211ENST00000575783 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
CTDNEP1-211ENST00000575783 MFSD6Q6ZSS7 791 aa18.97■□□□□ 0.63
CTDNEP1-211ENST00000575783 PPP2R3CQ969Q6 453 aa18.97■□□□□ 0.63
CTDNEP1-211ENST00000575783 CLEC1BQ9P126 229 aa18.97■□□□□ 0.63
CTDNEP1-211ENST00000575783 PLAGL2Q9UPG8 496 aa18.97■□□□□ 0.63
CTDNEP1-211ENST00000575783 LGALS2P05162 132 aa18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 GNAT1P11488 350 aa18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 UBA1P22314 1058 aaKnown RBP18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 HOXC8P31273 242 aa18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 CAMK1Q14012 370 aa18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 C20orf194Q5TEA3 1177 aa18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 GPKOWQ92917 476 aaPredicted RBP eCLIP18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 CLP1Q92989 425 aaKnown RBP18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 RPGRIP1Q96KN7 1286 aa18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 PDCD2LQ9BRP1 358 aa18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 BCAS3Q9H6U6 928 aa18.96■□□□□ 0.63
CTDNEP1-211ENST00000575783 ZDBF2Q9HCK1 2354 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 H0Y858 1186 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 NOP56O00567 594 aaKnown RBP18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 GHRP10912 638 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 AVPR2P30518 371 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 SIGLEC14Q08ET2 396 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 ADGRD2Q7Z7M1 963 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 RBM23Q86U06 439 aaKnown RBP18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 VSIG10LQ86VR7 867 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 SMRP1Q8NCR6 262 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 PNMA1Q8ND90 353 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 PLVAPQ9BX97 442 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 IRF2BPLQ9H1B7 796 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 TLR9Q9NR96 1032 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 HELLSQ9NRZ9 838 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 DMDP11532 3685 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 COL4A6Q14031 1691 aa18.95■□□□□ 0.62
CTDNEP1-211ENST00000575783 ENPP3O14638 875 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 CHRNA1P02708 482 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 TGFB3P10600 412 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 DNAJB1P25685 340 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 HOXA13P31271 388 aaPredicted RBP18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 NRIP1P48552 1158 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 HSD17B4P51659 736 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 ARHGAP4P98171 946 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 CBX2Q14781 532 aaPredicted RBP18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 EFHBQ8N7U6 833 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 KAT14Q9H8E8 782 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 JMJD4Q9H9V9 463 aa18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 BARX2Q9UMQ3 279 aaPredicted RBP18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 USP15Q9Y4E8 981 aaPredicted RBP18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 SUPT16HQ9Y5B9 1047 aaKnown RBP18.94■□□□□ 0.62
CTDNEP1-211ENST00000575783 MX1P20591 662 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 COASYQ13057 564 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 PGM5Q15124 567 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 FAM26DQ5JW98 314 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 DGKHQ86XP1 1220 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 TBC1D10CQ8IV04 446 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 IL31RAQ8NI17 732 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 ESR2Q92731 530 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 ZNF689Q96CS4 500 aaPredicted RBP18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 ASIC4Q96FT7 647 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 FAM227BQ96M60 508 aa18.93■□□□□ 0.62
CTDNEP1-211ENST00000575783 PHF7Q9BWX1 381 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms