RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 IYDQ6PHW0 289 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 EPM2AIP1Q7L775 607 aaPredicted RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 DENND6AQ8IWF6 608 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 PDCD10Q9BUL8 212 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 TPCN1Q9ULQ1 816 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 PYCARDQ9ULZ3 195 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 IQSEC3Q9UPP2 1182 aaPredicted RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 GMEB1Q9Y692 573 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 CECR2Q9BXF3 1484 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 CFAP73A6NFT4 308 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 CLK1P49759 484 aaKnown RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 AKR1D1P51857 326 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 PRAMEP78395 509 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 NR5A1Q13285 461 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 TRIP13Q15645 432 aaPredicted RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 DHX32Q7L7V1 743 aaKnown RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 PAG1Q9NWQ8 432 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 FNDC3AQ9Y2H6 1198 aaKnown RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 IPPQ9Y573 584 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 ATP5J2-PTCD1G3V325 749 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 TAF4O00268 1085 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 XPO1O14980 1071 aaKnown RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 KRT16P08779 473 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 ADCY2Q08462 1091 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 C19orf60Q96EN9 201 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 CDC5LQ99459 802 aaKnown RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 PHLPP2Q6ZVD8 1323 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 KDM2BQ8NHM5 1336 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 MAPRE1Q15691 268 aaKnown RBP11.34□□□□□ -0.59
USP6-206ENST00000575709 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 TAF8Q7Z7C8 310 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 MAGEB6Q8N7X4 407 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 ADAM21Q9UKJ8 722 aa11.34□□□□□ -0.59
USP6-206ENST00000575709 SNPHO15079 494 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 RGS5O15539 181 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 GYS1P13807 737 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 POLR2FP61218 127 aaKnown RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 SPATA1Q5VX52 437 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 STX12Q86Y82 276 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 KIAA0825Q8IV33 1275 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 SMAD5Q99717 465 aaKnown RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 ETNK1Q9HBU6 452 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 EPN1Q9Y6I3 576 aaPredicted RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 CALCRLQ16602 461 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 SIX6OS1Q8N1H7 587 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 SPRTNQ9H040 489 aaPredicted RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 LSG1Q9H089 658 aaKnown RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 TMOD3Q9NYL9 352 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 SOX5P35711 763 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 TTC30BQ8N4P2 665 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 MCRS1Q96EZ8 462 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 DSEQ9UL01 958 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 HADHAP40939 763 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 ADCY7P51828 1080 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 DYNLT1P63172 113 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 LLGL1Q15334 1064 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 DNM3Q9UQ16 869 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 KLHL20Q9Y2M5 609 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 PI4K2BG5E9Z4 385 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 NR1I2O75469 434 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 RFX1P22670 979 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 RHPN1Q8TCX5 695 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 LRRC59Q96AG4 307 aaKnown RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 GTSE1Q9NYZ3 720 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 ECEL1O95672 775 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 IL10P22301 178 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 DZIP3Q86Y13 1208 aaKnown RBP11.33□□□□□ -0.6
USP6-206ENST00000575709 BTBD6Q96KE9 485 aa11.33□□□□□ -0.6
USP6-206ENST00000575709 DTNBO60941 627 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 YWHAEP62258 255 aaKnown RBP11.32□□□□□ -0.6
USP6-206ENST00000575709 MIGA1Q8NAN2 632 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 MLXIPLQ9NP71 852 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 MCM8Q9UJA3 840 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 CPA1P15085 419 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 FRA10AC1Q70Z53 315 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 ARHGEF1Q92888 912 aaKnown RBP11.32□□□□□ -0.6
USP6-206ENST00000575709 ITGAXP20702 1163 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 NSUN2Q08J23 767 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP6-206ENST00000575709 FBXO38Q6PIJ6 1188 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 SUPT20HQ8NEM7 779 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 CLMNQ96JQ2 1002 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 HAUS4Q9H6D7 363 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 EIF3BP55884 814 aaKnown RBP11.32□□□□□ -0.6
USP6-206ENST00000575709 FANCEQ9HB96 536 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 CCT3P49368 545 aaKnown RBP11.32□□□□□ -0.6
USP6-206ENST00000575709 MDH1BQ5I0G3 518 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 CCT7Q99832 543 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 MRPL39Q9NYK5 338 aaKnown RBP11.32□□□□□ -0.6
USP6-206ENST00000575709 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 GMNCA6NCL1 334 aa11.32□□□□□ -0.6
USP6-206ENST00000575709 IMPG1Q17R60 797 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms