RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	TRPV6	Q9H1D0	765 aa		28.86	■■■□□ 2.21
SRRM2-223	ENST00000575701	KCNH7	Q9NS40	1196 aa		28.86	■■■□□ 2.21
SRRM2-223	ENST00000575701	PCDHA4	Q9UN74	947 aa		28.86	■■■□□ 2.21
SRRM2-223	ENST00000575701	DOCK5	Q9H7D0	1870 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	HAS3	O00219	553 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	ZNF286B	P0CG31	522 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	ITGB8	P26012	769 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	PSEN2	P49810	448 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	MFSD10	Q14728	455 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	DAGLB	Q8NCG7	672 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	KIF2C	Q99661	725 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	GPR20	Q99678	358 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	LIMCH1	Q9UPQ0	1083 aa		28.85	■■■□□ 2.21
SRRM2-223	ENST00000575701	MEIS1	O00470	390 aa		28.84	■■■□□ 2.21
SRRM2-223	ENST00000575701	ATP9A	O75110	1047 aa		28.84	■■■□□ 2.21
SRRM2-223	ENST00000575701	LARGE1	O95461	756 aa		28.84	■■■□□ 2.21
SRRM2-223	ENST00000575701	KIAA0753	Q2KHM9	967 aa		28.84	■■■□□ 2.21
SRRM2-223	ENST00000575701	MFSD5	Q6N075	450 aa		28.84	■■■□□ 2.21
SRRM2-223	ENST00000575701	BCAS3	Q9H6U6	928 aa		28.84	■■■□□ 2.21
SRRM2-223	ENST00000575701	CTDNEP1	O95476	244 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	LGALS2	P05162	132 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	CHMP4BP1	P59074	171 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	FPGS	Q05932	587 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	BLID	Q8IZY5	108 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	C7orf31	Q8N865	590 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	NECAB1	Q8N987	351 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	C16orf70	Q9BSU1	422 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	HIPK3	Q9H422	1215 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	TRMT13	Q9NUP7	481 aa	Known RBP	28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	PCDH10	Q9P2E7	1040 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	NFASC	O94856	1347 aa		28.83	■■■□□ 2.21
SRRM2-223	ENST00000575701	ADAMTS3	O15072	1205 aa		28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	SET	Q01105	290 aa	Predicted RBP	28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	TMEM199	Q8N511	208 aa		28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	CYP2W1	Q8TAV3	490 aa		28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	RASGRP4	Q8TDF6	673 aa		28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	AIFM3	Q96NN9	605 aa		28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	SDF4	Q9BRK5	362 aa		28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	ORC3	Q9UBD5	711 aa	Predicted RBP	28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	GTF2IRD1	Q9UHL9	959 aa		28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	ZNF215	Q9UL58	517 aa	Predicted RBP	28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701	NOD1	Q9Y239	953 aa		28.82	■■■□□ 2.2
SRRM2-223	ENST00000575701		H3BRB1	525 aa		28.81	■■■□□ 2.2
SRRM2-223	ENST00000575701	RABEP1	Q15276	862 aa		28.81	■■■□□ 2.2
SRRM2-223	ENST00000575701	ZSCAN31	Q96LW9	406 aa	Predicted RBP	28.81	■■■□□ 2.2
SRRM2-223	ENST00000575701	ALG1	Q9BT22	464 aa		28.81	■■■□□ 2.2
SRRM2-223	ENST00000575701	NOC4L	Q9BVI4	516 aa	Known RBP	28.81	■■■□□ 2.2
SRRM2-223	ENST00000575701	PPP1R12C	Q9BZL4	782 aa		28.81	■■■□□ 2.2
SRRM2-223	ENST00000575701	TUT1	Q9H6E5	874 aa	Known RBP	28.81	■■■□□ 2.2
SRRM2-223	ENST00000575701	JPH1	Q9HDC5	661 aa	Predicted RBP	28.81	■■■□□ 2.2
SRRM2-223	ENST00000575701	CIITA	P33076	1130 aa		28.8	■■■□□ 2.2
SRRM2-223	ENST00000575701	PPIG	Q13427	754 aa	Known RBP eCLIP	28.8	■■■□□ 2.2	9e-12	■□□□□ 10.8
SRRM2-223	ENST00000575701	SEPT1	Q8WYJ6	367 aa		28.8	■■■□□ 2.2
SRRM2-223	ENST00000575701	PHF20	Q9BVI0	1012 aa		28.8	■■■□□ 2.2
SRRM2-223	ENST00000575701	AGO4	Q9HCK5	861 aa	Known RBP	28.8	■■■□□ 2.2
SRRM2-223	ENST00000575701	PKD2L1	Q9P0L9	805 aa		28.8	■■■□□ 2.2
SRRM2-223	ENST00000575701	IGLV3-22	A0A075B6J6	115 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	FAM86B1	E9PN63	330 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	FAM86B2	P0C5J1	330 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	AR	P10275	920 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	USP11	P51784	963 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	SP4	Q02446	784 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	PTGIS	Q16647	500 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	PLA2G4D	Q86XP0	818 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	NSUN7	Q8NE18	718 aa	Known RBP	28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	SH2B1	Q9NRF2	756 aa	Predicted RBP	28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	HDAC6	Q9UBN7	1215 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701	SLC9A2	Q9UBY0	812 aa		28.79	■■■□□ 2.2
SRRM2-223	ENST00000575701		M0R2N6	131 aa		28.78	■■■□□ 2.2
SRRM2-223	ENST00000575701	TCF7	P36402	384 aa	Predicted RBP	28.78	■■■□□ 2.2
SRRM2-223	ENST00000575701	NPY5R	Q15761	445 aa		28.78	■■■□□ 2.2
SRRM2-223	ENST00000575701	CCDC155	Q8N6L0	562 aa		28.78	■■■□□ 2.2
SRRM2-223	ENST00000575701	TRIOBP	Q9H2D6	2365 aa		28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	RANBP2	P49792	3224 aa	Known RBP	28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	PITPNM1	O00562	1244 aa		28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	CYP2C18	P33260	490 aa		28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	BFSP2	Q13515	415 aa		28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	LRIT3	Q3SXY7	679 aa		28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	GDF6	Q6KF10	455 aa	Predicted RBP	28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	KRT25	Q7Z3Z0	450 aa		28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	PPP1R13L	Q8WUF5	828 aa		28.77	■■■□□ 2.2
SRRM2-223	ENST00000575701	ST18	O60284	1047 aa		28.76	■■■□□ 2.19
SRRM2-223	ENST00000575701	CYP2C9	P11712	490 aa		28.76	■■■□□ 2.19
SRRM2-223	ENST00000575701	FDPS	P14324	419 aa	Known RBP	28.76	■■■□□ 2.19
SRRM2-223	ENST00000575701	FXR1	P51114	621 aa	Known RBP eCLIP	28.76	■■■□□ 2.19	2e-6	■■■□□ 18.5
SRRM2-223	ENST00000575701	UTP14C	Q5TAP6	766 aa	Known RBP	28.76	■■■□□ 2.19
SRRM2-223	ENST00000575701	KCNJ14	Q9UNX9	436 aa		28.76	■■■□□ 2.19
SRRM2-223	ENST00000575701	GTF3C3	Q9Y5Q9	886 aa		28.76	■■■□□ 2.19
SRRM2-223	ENST00000575701	EMSY	Q7Z589	1322 aa		28.75	■■■□□ 2.19
SRRM2-223	ENST00000575701	GSTTP1	A0A1W2PQM5	241 aa		28.75	■■■□□ 2.19
SRRM2-223	ENST00000575701	ITGB3BP	Q13352	177 aa	Predicted RBP	28.75	■■■□□ 2.19
SRRM2-223	ENST00000575701	NONO	Q15233	471 aa	Known RBP eCLIP	28.75	■■■□□ 2.19	2e-6	■■■□□ 18.7
SRRM2-223	ENST00000575701	CAGE1	Q8TC20	777 aa		28.75	■■■□□ 2.19
SRRM2-223	ENST00000575701	TBCK	Q8TEA7	893 aa		28.75	■■■□□ 2.19
SRRM2-223	ENST00000575701	LLPH	Q9BRT6	129 aa	Known RBP	28.75	■■■□□ 2.19
SRRM2-223	ENST00000575701	TBC1D22B	Q9NU19	505 aa		28.75	■■■□□ 2.19
SRRM2-223	ENST00000575701	IPO5	O00410	1097 aa	Known RBP	28.74	■■■□□ 2.19
SRRM2-223	ENST00000575701	CSF2RA	P15509	400 aa		28.74	■■■□□ 2.19
SRRM2-223	ENST00000575701	ST3GAL1	Q11201	340 aa		28.74	■■■□□ 2.19
SRRM2-223	ENST00000575701	PRR16	Q569H4	304 aa		28.74	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms