RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	KRT76	Q01546	638 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	NEDD9	Q14511	834 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	SPECC1	Q5M775	1068 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	KRT79	Q5XKE5	535 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	SEPT14	Q6ZU15	432 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	KCTD17	Q8N5Z5	321 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	RDM1	Q8NG50	284 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	ERMN	Q8TAM6	284 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	EPSTI1	Q96J88	318 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	SDF4	Q9BRK5	362 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	ARHGAP39	Q9C0H5	1083 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	GOLPH3L	Q9H4A5	285 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	CCDC39	Q9UFE4	941 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	USP25	Q9UHP3	1055 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	TCEAL9	Q9UHQ7	104 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	NRBP1	Q9UHY1	535 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	VAV3	Q9UKW4	847 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	KCNH3	Q9ULD8	1083 aa		13.4	□□□□□ -0.26
PRPF8-212	ENST00000575116	DOCK3	Q8IZD9	2030 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	ATP9A	O75110	1047 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	LIG1	P18858	919 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	SFN	P31947	248 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	SYK	P43405	635 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	NDUFA8	P51970	172 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	PRMT2	P55345	433 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	ITGB3BP	Q13352	177 aa	Predicted RBP	13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	SNW1	Q13573	536 aa	Known RBP	13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	TTLL4	Q14679	1199 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	EPHA7	Q15375	998 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	TAPT1	Q6NXT6	567 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	CABP7	Q86V35	215 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	SCFD2	Q8WU76	684 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	GJA10	Q969M2	543 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	CALML4	Q96GE6	196 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	TIGD1	Q96MW7	591 aa		13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	DDX19A	Q9NUU7	478 aa	Known RBP	13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	DDX41	Q9UJV9	622 aa	Known RBP	13.39	□□□□□ -0.27
PRPF8-212	ENST00000575116	POTEM	A6NI47	508 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	ZNF202	O95125	648 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	FLT3LG	P49771	235 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	JAK3	P52333	1124 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	ACVR2B	Q13705	512 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	TPRN	Q4KMQ1	711 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	HYI	Q5T013	277 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	HAUS3	Q68CZ6	603 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	IQSEC1	Q6DN90	963 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	NCAPH2	Q6IBW4	605 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	CCDC62	Q6P9F0	684 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	USP49	Q70CQ1	688 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	EEPD1	Q7L9B9	569 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	CD99L2	Q8TCZ2	262 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	NEK9	Q8TD19	979 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	SYAP1	Q96A49	352 aa	Predicted RBP	13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	MMTAG2	Q9BU76	263 aa	Known RBP	13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	KATNBL1	Q9H079	304 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	NT5C3A	Q9H0P0	336 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	UNC45A	Q9H3U1	944 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	DACT1	Q9NYF0	836 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	SLC9A2	Q9UBY0	812 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	SRRD	Q9UH36	339 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	GABRQ	Q9UN88	632 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	KDM3A	Q9Y4C1	1321 aa		13.38	□□□□□ -0.27
PRPF8-212	ENST00000575116	NKRF	O15226	690 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	NR1I2	O75469	434 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	ECM2	O94769	699 aa	Predicted RBP	13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	TXN	P10599	105 aa	Known RBP	13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	RPA1	P27694	616 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	CDC25A	P30304	524 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	SP2	Q02086	613 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	PRKCZ	Q05513	592 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	MFSD14C	Q5VZR4	134 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	KANK3	Q6NY19	840 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	MIER3	Q7Z3K6	550 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	FBXO16	Q8IX29	292 aa	Predicted RBP	13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	IQUB	Q8NA54	791 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	SNX29	Q8TEQ0	813 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	CCDC34	Q96HJ3	373 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	UIMC1	Q96RL1	719 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	HSD17B14	Q9BPX1	270 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	CUEDC2	Q9H467	287 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	TUFT1	Q9NNX1	390 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	DISC1	Q9NRI5	854 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	FLRT1	Q9NZU1	646 aa		13.37	□□□□□ -0.27
PRPF8-212	ENST00000575116	CASP8AP2	Q9UKL3	1982 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	PP2D1	A8MPX8	630 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	WDR64	B1ANS9	1081 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	EML1	O00423	815 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	CTAGE5	O15320	804 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	POLR2D	O15514	142 aa	Known RBP	13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	KIN	O60870	393 aa	Known RBP	13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	ATG7	O95352	703 aa		13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	UBA1	P22314	1058 aa	Known RBP	13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	CCT6A	P40227	531 aa	Known RBP	13.36	□□□□□ -0.27
PRPF8-212	ENST00000575116	CCL14	Q16627	93 aa		13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms