RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 PEX10O60683 326 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 CABYRO75952 493 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 TDP2O95551 362 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 TRAF1Q13077 416 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 ANO6Q4KMQ2 910 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 USP17L6PQ6QN14 398 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 SASS6Q6UVJ0 657 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 SLC39A5Q6ZMH5 540 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 C11orf57Q6ZUT1 292 aaPredicted RBP10.83□□□□□ -0.68
NDE1-208ENST00000573694 POTEDQ86YR6 584 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 TDHQ8IZJ6 230 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 ANKRD35Q8N283 1001 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 SAMD3Q8N6K7 520 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 PDILTQ8N807 584 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 EPSTI1Q96J88 318 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 SDF4Q9BRK5 362 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 SENP6Q9GZR1 1112 aaPredicted RBP10.83□□□□□ -0.68
NDE1-208ENST00000573694 RANBP17Q9H2T7 1088 aaKnown RBP10.83□□□□□ -0.68
NDE1-208ENST00000573694 PSTPIP2Q9H939 334 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 FAM13BQ9NYF5 915 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 SERTAD1Q9UHV2 236 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 LCTP09848 1927 aa10.83□□□□□ -0.68
NDE1-208ENST00000573694 POLR2DO15514 142 aaKnown RBP10.82□□□□□ -0.68
NDE1-208ENST00000573694 ACTN4O43707 911 aaKnown RBP10.82□□□□□ -0.68
NDE1-208ENST00000573694 NEMFO60524 1076 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 CCNT1O60563 726 aaKnown RBP10.82□□□□□ -0.68
NDE1-208ENST00000573694 ZNF865P0CJ78 1059 aaPredicted RBP10.82□□□□□ -0.68
NDE1-208ENST00000573694 PNOCQ13519 176 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 LRRC41Q15345 812 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 STX1AQ16623 288 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 LONRF3Q496Y0 759 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 KRBA2Q6ZNG9 492 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 ANKRD33Q7Z3H0 272 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 GRAMD1CQ8IYS0 662 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 C7orf61Q8IZ16 206 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 TRPV1Q8NER1 839 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 TIGD1Q96MW7 591 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 ANO3Q9BYT9 981 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 DNAJC25Q9H1X3 360 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 XPNPEP3Q9NQH7 507 aa10.82□□□□□ -0.68
NDE1-208ENST00000573694 ADD3Q9UEY8 706 aaKnown RBP10.82□□□□□ -0.68
NDE1-208ENST00000573694 PP2D1A8MPX8 630 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 BIN1O00499 593 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 MEIS2O14770 477 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 ICAM1P05362 532 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 OR52Z1P0C646 297 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 ACVR2BQ13705 512 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 LRRC26Q2I0M4 334 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 ARL6IP4Q66PJ3 421 aaKnown RBP10.81□□□□□ -0.68
NDE1-208ENST00000573694 IQSEC1Q6DN90 963 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 FAM133AQ8N9E0 248 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 CNNM3Q8NE01 707 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 KLHDC9Q8NEP7 349 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 MORC4Q8TE76 937 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 DHX58Q96C10 678 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 UBE2OQ9C0C9 1292 aaKnown RBP10.81□□□□□ -0.68
NDE1-208ENST00000573694 UPF3AQ9H1J1 476 aaKnown RBP10.81□□□□□ -0.68
NDE1-208ENST00000573694 CBX8Q9HC52 389 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 MAP3K20Q9NYL2 800 aaKnown RBP10.81□□□□□ -0.68
NDE1-208ENST00000573694 KIAA1468Q9P260 1216 aa10.81□□□□□ -0.68
NDE1-208ENST00000573694 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
NDE1-208ENST00000573694 ZEB2O60315 1214 aa10.8□□□□□ -0.68
NDE1-208ENST00000573694 CDC25AP30304 524 aa10.8□□□□□ -0.68
NDE1-208ENST00000573694 HOXA13P31271 388 aaPredicted RBP10.8□□□□□ -0.68
NDE1-208ENST00000573694 MAGEA10P43363 369 aaPredicted RBP10.8□□□□□ -0.68
NDE1-208ENST00000573694 GJA9P57773 515 aa10.8□□□□□ -0.68
NDE1-208ENST00000573694 DNERQ8NFT8 737 aa10.8□□□□□ -0.68
NDE1-208ENST00000573694 FAM200AQ8TCP9 573 aa10.8□□□□□ -0.68
NDE1-208ENST00000573694 ZNF536O15090 1300 aa10.8□□□□□ -0.68
NDE1-208ENST00000573694 TMEM265A0A087WTH1 108 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 DCDC2CA8MYV0 355 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 LAD1O00515 517 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 KIAA0355O15063 1070 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 NKRFO15226 690 aaKnown RBP eCLIP10.79□□□□□ -0.68
NDE1-208ENST00000573694 ADAMTS4O75173 837 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 SNAI1O95863 264 aaPredicted RBP10.79□□□□□ -0.68
NDE1-208ENST00000573694 CASP1P29466 404 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 LONP1P36776 959 aaKnown RBP10.79□□□□□ -0.68
NDE1-208ENST00000573694 PRPHP41219 470 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 RTP1P59025 263 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 AP3B2Q13367 1082 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 ORC2Q13416 577 aaPredicted RBP10.79□□□□□ -0.68
NDE1-208ENST00000573694 KARSQ15046 597 aaKnown RBP10.79□□□□□ -0.68
NDE1-208ENST00000573694 E2F4Q16254 413 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 CALCRLQ16602 461 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 DPCR1Q3MIW9 517 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 ISM2Q6H9L7 571 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 CCSAPQ6IQ19 270 aaPredicted RBP10.79□□□□□ -0.68
NDE1-208ENST00000573694 DTHD1Q6ZMT9 781 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 LUZP1Q86V48 1076 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 CPXCR1Q8N123 301 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 LRRC15Q8TF66 581 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 TBC1D5Q92609 795 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 GLT1D1Q96MS3 346 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 TRERF1Q96PN7 1200 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 GLT8D2Q9H1C3 349 aa10.79□□□□□ -0.68
NDE1-208ENST00000573694 RAVER2Q9HCJ3 691 aaKnown RBP10.79□□□□□ -0.68
NDE1-208ENST00000573694 VTA1Q9NP79 307 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms