RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PLCG2P16885 1265 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 APBA1Q02410 837 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 SEPT2Q15019 361 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 KCTD16Q68DU8 428 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 TADA2BQ86TJ2 420 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 LRRC47Q8N1G4 583 aaKnown RBP17.23■□□□□ 0.35
NUP88-207ENST00000573584 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 GPCPD1Q9NPB8 672 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 DDX25Q9UHL0 483 aaKnown RBP17.23■□□□□ 0.35
NUP88-207ENST00000573584 NAV1Q8NEY1 1877 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 FAM153BP0C7A2 387 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 PAK2Q13177 524 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 ENOX2Q16206 610 aaKnown RBP17.23■□□□□ 0.35
NUP88-207ENST00000573584 SLC18A3Q16572 532 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 UBE2SQ16763 222 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 FAM153CQ494X1 144 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 CFAP58Q5T655 872 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 PPP4R3AQ6IN85 833 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 NELFCDQ8IXH7 590 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 CEP63Q96MT8 703 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 CCDC43Q96MW1 224 aaKnown RBP17.23■□□□□ 0.35
NUP88-207ENST00000573584 FAM153AQ9UHL3 310 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 FAM169AQ9Y6X4 670 aa17.23■□□□□ 0.35
NUP88-207ENST00000573584 SKOR1P84550 965 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 RAPGEF1Q13905 1077 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 KIAA0753Q2KHM9 967 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 ASPRV1Q53RT3 343 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 IQCKQ8N0W5 287 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 HAS1Q92839 578 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 KRT12Q99456 494 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 FGFBP2Q9BYJ0 223 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 CD209Q9NNX6 404 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 MTMR4Q9NYA4 1195 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 ADAMTS1Q9UHI8 967 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 A6NNZ2 444 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 GNA14O95837 355 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 EIF6P56537 245 aaKnown RBP17.22■□□□□ 0.35
NUP88-207ENST00000573584 RHBDL3P58872 404 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 RNASE9P60153 205 aaKnown RBP17.22■□□□□ 0.35
NUP88-207ENST00000573584 TUBB8Q3ZCM7 444 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 RC3H1Q5TC82 1133 aaKnown RBP17.22■□□□□ 0.35
NUP88-207ENST00000573584 MEI1Q5TIA1 1274 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 SH2D3CQ8N5H7 860 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 PCDHA12Q9UN75 941 aa17.22■□□□□ 0.35
NUP88-207ENST00000573584 PACSIN2Q9UNF0 486 aaPredicted RBP17.22■□□□□ 0.35
NUP88-207ENST00000573584 A0A087X0T9 212 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 FAM228BP0C875 321 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 KLHL30Q0D2K2 578 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 PTF1AQ7RTS3 328 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 TRIM59Q8IWR1 403 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 PCDHGC5Q9Y5F6 944 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 GRID2IPA4D2P6 1211 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 GUCY2FP51841 1108 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 PDCLQ13371 301 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 SF3B2Q13435 895 aaKnown RBP17.21■□□□□ 0.35
NUP88-207ENST00000573584 FAM133AQ8N9E0 248 aa17.21■□□□□ 0.35
NUP88-207ENST00000573584 ZNF233A6NK53 670 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 ATP1A2P50993 1020 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 CCDC65Q8IXS2 484 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
NUP88-207ENST00000573584 E9PMD0 336 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 CPP00450 1065 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 EPS15P42566 896 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 HERC4Q5GLZ8 1057 aaPredicted RBP17.2■□□□□ 0.34
NUP88-207ENST00000573584 ARHGEF1Q92888 912 aaKnown RBP17.2■□□□□ 0.34
NUP88-207ENST00000573584 PACSIN1Q9BY11 444 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 KIAA1024Q9UPX6 916 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 SAMM50Q9Y512 469 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 DDX60LQ5H9U9 1706 aaKnown RBP17.2■□□□□ 0.34
NUP88-207ENST00000573584 PNMA6FA0A0J9YX94 578 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
NUP88-207ENST00000573584 CDC37Q16543 378 aaPredicted RBP17.2■□□□□ 0.34
NUP88-207ENST00000573584 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
NUP88-207ENST00000573584 UIMC1Q96RL1 719 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 AIPL1Q9NZN9 384 aa17.2■□□□□ 0.34
NUP88-207ENST00000573584 NDUFAB1O14561 156 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 UFL1O94874 794 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 GPSM2P81274 684 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 ADAM9Q13443 819 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 MFSD14BQ5SR56 506 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 C15orf52Q6ZUT6 534 aaKnown RBP17.19■□□□□ 0.34
NUP88-207ENST00000573584 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 ADGRF4Q8IZF3 695 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 CASKIN2Q8WXE0 1202 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 NPHP3-ACAD11A0A0J9YXS1 232 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 PPP1R11O60927 126 aaPredicted RBP17.19■□□□□ 0.34
NUP88-207ENST00000573584 PLA2G4BP0C869 781 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 LIG3P49916 1009 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 MARSP56192 900 aaKnown RBP17.19■□□□□ 0.34
NUP88-207ENST00000573584 TRADDQ15628 312 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 ASIC2Q16515 512 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 SCFD1Q8WVM8 642 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 CUL5Q93034 780 aa17.19■□□□□ 0.34
NUP88-207ENST00000573584 EMILIN3Q9NT22 766 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms