RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 ANKRD7Q92527 254 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 SERPINI1Q99574 410 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 FOXP3Q9BZS1 431 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 ARHGEF37A1IGU5 675 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 SRGAP2BP0DMP2 458 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 HNRNPH2P55795 449 aaKnown RBP13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 TTC39CQ8N584 583 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 HNRNPLLQ8WVV9 542 aaKnown RBP13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 FAM20AQ96MK3 541 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 CTIFO43310 598 aaKnown RBP13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 SEC31AO94979 1220 aaKnown RBP13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 ZWINTO95229 277 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 KRT3P12035 628 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 LRIG3Q6UXM1 1119 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 SYDE1Q6ZW31 735 aaPredicted RBP13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 ENOSF1Q7L5Y1 443 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 C3orf20Q8ND61 904 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 CFAP61Q8NHU2 1237 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 TBCKQ8TEA7 893 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 LIMA1Q9UHB6 759 aaKnown RBP13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 ZDHHC9Q9Y397 364 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
PCDHGA9-201ENST00000573521 IQANK1A0A1B0GTG1 560 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 LDHAP00338 332 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 CCDC93Q567U6 631 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 LRCH2Q5VUJ6 765 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 SLFN12LQ6IEE8 588 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 DIP2CQ9Y2E4 1556 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 TADA3O75528 432 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 GUCY2CP25092 1073 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 ARHGAP18Q8N392 663 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 RBM41Q96IZ5 413 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 PPP1R9AQ9ULJ8 1098 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 TULP4Q9NRJ4 1543 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 SSU72P8A0A1W2PR75 194 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 ZNF233A6NK53 670 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 IFNB1P01574 187 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 MYCLP12524 364 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 CHRNA3P32297 505 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 DHX34Q14147 1143 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 RABL6Q3YEC7 729 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 FOXP4Q8IVH2 680 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 ACRBPQ8NEB7 543 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 ZNF653Q96CK0 615 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 KIF2CQ99661 725 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 MRGBPQ9NV56 204 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 STK38LQ9Y2H1 464 aa13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
PCDHGA9-201ENST00000573521 MSH2P43246 934 aa13.4□□□□□ -0.27
PCDHGA9-201ENST00000573521 KIRREL3Q8IZU9 778 aa13.4□□□□□ -0.27
PCDHGA9-201ENST00000573521 COG1Q8WTW3 980 aa13.4□□□□□ -0.27
PCDHGA9-201ENST00000573521 DCAF4Q8WV16 495 aa13.4□□□□□ -0.27
PCDHGA9-201ENST00000573521 CNKSR1Q969H4 720 aa13.4□□□□□ -0.27
PCDHGA9-201ENST00000573521 SLAIN2Q9P270 581 aa13.4□□□□□ -0.27
PCDHGA9-201ENST00000573521 KIF1CO43896 1103 aaKnown RBP13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 STMN1P16949 149 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 ADORA1P30542 326 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 DDIT3P35638 169 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 ZBTB17Q13105 803 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 PRPSAP1Q14558 356 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 RCSD1Q6JBY9 416 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 CASC4Q6P4E1 433 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 CENPUQ71F23 418 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 RNF34Q969K3 372 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 RIOK1Q9BRS2 568 aaKnown RBP13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 PLA2G12BQ9BX93 195 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 TUBE1Q9UJT0 475 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 PCDHB6Q9Y5E3 794 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 CD2APQ9Y5K6 639 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 ORC4O43929 436 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 TMEM191BP0C7N4 346 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 PLCG1P19174 1290 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 GYG1P46976 350 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 RASA3Q14644 834 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 TRIM4Q9C037 500 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 SERPINB13Q9UIV8 391 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 CAPN11Q9UMQ6 739 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 ARHGAP42A6NI28 874 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 MCF2LO15068 1137 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 ACTN1P12814 892 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 SPARCL1Q14515 664 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 PROSER3Q2NL68 480 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 GDAP1L1Q96MZ0 367 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 CCSER1Q9C0I3 900 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 DONSONQ9NYP3 566 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 ARHGEF40Q8TER5 1519 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
PCDHGA9-201ENST00000573521 MYBL1P10243 752 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms