RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 PPP4R3AQ6IN85 833 aa19.61■□□□□ 0.73
LITAF-212ENST00000573332 CYFIP1Q7L576 1253 aa19.61■□□□□ 0.73
LITAF-212ENST00000573332 SPATA33Q96N06 139 aa19.61■□□□□ 0.73
LITAF-212ENST00000573332 SENP6Q9GZR1 1112 aaPredicted RBP19.61■□□□□ 0.73
LITAF-212ENST00000573332 BCAS3Q9H6U6 928 aa19.61■□□□□ 0.73
LITAF-212ENST00000573332 PURAQ00577 322 aaKnown RBP19.6■□□□□ 0.73
LITAF-212ENST00000573332 PRR16Q569H4 304 aa19.6■□□□□ 0.73
LITAF-212ENST00000573332 C1orf53Q5VUE5 145 aa19.6■□□□□ 0.73
LITAF-212ENST00000573332 LARP1BQ659C4 914 aaKnown RBP19.6■□□□□ 0.73
LITAF-212ENST00000573332 GLT1D1Q96MS3 346 aa19.6■□□□□ 0.73
LITAF-212ENST00000573332 HTATIP2Q9BUP3 242 aa19.6■□□□□ 0.73
LITAF-212ENST00000573332 FAM205CA6NFA0 338 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 TDP2O95551 362 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 PDCP20941 246 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 SNX17Q15036 470 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 DGKDQ16760 1214 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 CXCL17Q6UXB2 119 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 SLC39A5Q6ZMH5 540 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 FERMT2Q96AC1 680 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 SEZ6LQ9BYH1 1024 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 TBC1D22BQ9NU19 505 aa19.59■□□□□ 0.73
LITAF-212ENST00000573332 IPO5O00410 1097 aaKnown RBP19.58■□□□□ 0.72
LITAF-212ENST00000573332 DHX15O43143 795 aaKnown RBP19.58■□□□□ 0.72
LITAF-212ENST00000573332 ITGB3BPQ13352 177 aaPredicted RBP19.58■□□□□ 0.72
LITAF-212ENST00000573332 LETM2Q2VYF4 491 aa19.58■□□□□ 0.72
LITAF-212ENST00000573332 NOSTRINQ8IVI9 506 aa19.58■□□□□ 0.72
LITAF-212ENST00000573332 GPR20Q99678 358 aa19.58■□□□□ 0.72
LITAF-212ENST00000573332 SDF4Q9BRK5 362 aa19.58■□□□□ 0.72
LITAF-212ENST00000573332 ZNF577Q9BSK1 485 aa19.58■□□□□ 0.72
LITAF-212ENST00000573332 MTG1Q9BT17 334 aaPredicted RBP19.58■□□□□ 0.72
LITAF-212ENST00000573332 STARD7Q9NQZ5 370 aa19.58■□□□□ 0.72
LITAF-212ENST00000573332 KIF28PB7ZC32 967 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 H3BQV1 296 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 NOP56O00567 594 aaKnown RBP19.57■□□□□ 0.72
LITAF-212ENST00000573332 MSH4O15457 936 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 MYL3P08590 195 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 SLC43A3Q8NBI5 491 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 SLC5A5Q92911 643 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 RIT2Q99578 217 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 JPH1Q9HDC5 661 aaPredicted RBP19.57■□□□□ 0.72
LITAF-212ENST00000573332 PKD2L1Q9P0L9 805 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 SLC9A2Q9UBY0 812 aa19.57■□□□□ 0.72
LITAF-212ENST00000573332 DDX25Q9UHL0 483 aaKnown RBP19.57■□□□□ 0.72
LITAF-212ENST00000573332 A0A0U1RQG5 324 aaPredicted RBP19.56■□□□□ 0.72
LITAF-212ENST00000573332 TBX3O15119 743 aa19.56■□□□□ 0.72
LITAF-212ENST00000573332 SORBS3O60504 671 aa19.56■□□□□ 0.72
LITAF-212ENST00000573332 CCNT1O60563 726 aaKnown RBP19.56■□□□□ 0.72
LITAF-212ENST00000573332 TRAPPC10P48553 1259 aa19.56■□□□□ 0.72
LITAF-212ENST00000573332 MLLT1Q03111 559 aaPredicted RBP19.56■□□□□ 0.72
LITAF-212ENST00000573332 GNL2Q13823 731 aaKnown RBP19.56■□□□□ 0.72
LITAF-212ENST00000573332 SEPT1Q8WYJ6 367 aa19.56■□□□□ 0.72
LITAF-212ENST00000573332 MYH7BA7E2Y1 1941 aa19.56■□□□□ 0.72
LITAF-212ENST00000573332 GSTTP1A0A1W2PQM5 241 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 SLC37A4O43826 429 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 ATG7O95352 703 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 F2P00734 622 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 CDK7P50613 346 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 ORC2Q13416 577 aaPredicted RBP19.55■□□□□ 0.72
LITAF-212ENST00000573332 LRRC26Q2I0M4 334 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 ETNPPLQ8TBG4 499 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 KAT2BQ92831 832 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 FAM20AQ96MK3 541 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 C16orf70Q9BSU1 422 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 KCNMB3Q9NPA1 279 aa19.55■□□□□ 0.72
LITAF-212ENST00000573332 GRIN2DO15399 1336 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 ARVCFO00192 962 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 HAS3O00219 553 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 PSMD10O75832 226 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 PDIA4P13667 645 aaKnown RBP19.54■□□□□ 0.72
LITAF-212ENST00000573332 SYT1P21579 422 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 ITGA7Q13683 1181 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 ZNF746Q6NUN9 644 aaPredicted RBP19.54■□□□□ 0.72
LITAF-212ENST00000573332 VTI1AQ96AJ9 217 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 TOX2Q96NM4 488 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 KATNAL1Q9BW62 490 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 TELO2Q9Y4R8 837 aa19.54■□□□□ 0.72
LITAF-212ENST00000573332 CCNE2O96020 404 aa19.53■□□□□ 0.72
LITAF-212ENST00000573332 LGALS2P05162 132 aa19.53■□□□□ 0.72
LITAF-212ENST00000573332 HSP90AA1P07900 732 aaKnown RBP19.53■□□□□ 0.72
LITAF-212ENST00000573332 TCF7P36402 384 aaPredicted RBP19.53■□□□□ 0.72
LITAF-212ENST00000573332 ATN1P54259 1190 aaPredicted RBP19.53■□□□□ 0.72
LITAF-212ENST00000573332 ACTR2P61160 394 aa19.53■□□□□ 0.72
LITAF-212ENST00000573332 KRT76Q01546 638 aa19.53■□□□□ 0.72
LITAF-212ENST00000573332 MCTP1Q6DN14 999 aa19.53■□□□□ 0.72
LITAF-212ENST00000573332 B3GNT9Q6UX72 402 aa19.53■□□□□ 0.72
LITAF-212ENST00000573332 ANKRD33Q7Z3H0 272 aa19.53■□□□□ 0.72
LITAF-212ENST00000573332 FOXD4L1Q9NU39 408 aa19.53■□□□□ 0.72
LITAF-212ENST00000573332 NOL7Q9UMY1 257 aaKnown RBP19.53■□□□□ 0.72
LITAF-212ENST00000573332 MROH7Q68CQ1 1323 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 IGKV6D-21A0A0A0MT36 114 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 WNT7AO00755 349 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 LGR5O75473 907 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 RTP1P59025 263 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 PSMC6P62333 389 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 SP4Q02446 784 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 PTPN11Q06124 597 aaPredicted RBP19.52■□□□□ 0.72
LITAF-212ENST00000573332 LRCH2Q5VUJ6 765 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 NFRKBQ6P4R8 1299 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 ABHD15Q6UXT9 468 aa19.52■□□□□ 0.72
LITAF-212ENST00000573332 SESTD1Q86VW0 696 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms