RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 V9GY48 417 aaPredicted RBP10.42□□□□□ -0.74
NDE1-207ENST00000573203 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
NDE1-207ENST00000573203 LAMA2P24043 3122 aaKnown RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 FAM205CA6NFA0 338 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 SPDYE3A6NKU9 549 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 hCG_1984214I3L0E3 225 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 UBA1P22314 1058 aaKnown RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 CYP2C18P33260 490 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 ADD1P35611 737 aaKnown RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 EPHB4P54760 987 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 SP2Q02086 613 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 FUT2Q10981 343 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 CELF3Q5SZQ8 465 aaKnown RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 MYSM1Q5VVJ2 828 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 PCNX4Q63HM2 1172 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 NFRKBQ6P4R8 1299 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 RUFY3Q7L099 469 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 FBXL16Q8N461 479 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 ZNF713Q8N859 430 aaPredicted RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 PPP1R13LQ8WUF5 828 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 IL17RAQ96F46 866 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 RNPC3Q96LT9 517 aaKnown RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 SPATA33Q96N06 139 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 INPP4AQ96PE3 977 aaPredicted RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 EHMT1Q9H9B1 1298 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 MLXIPQ9HAP2 919 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 FAM217BQ9NTX9 383 aaPredicted RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 TRMT13Q9NUP7 481 aaKnown RBP10.41□□□□□ -0.74
NDE1-207ENST00000573203 NOD1Q9Y239 953 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 PCDHGA4Q9Y5G9 962 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 CYP46A1Q9Y6A2 500 aa10.41□□□□□ -0.74
NDE1-207ENST00000573203 LAMA3Q16787 3333 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 UMODL1Q5DID0 1318 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 SZT2Q5T011 3432 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 STXBP3O00186 592 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 FIBPO43427 364 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 CYP2C9P11712 490 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 CSF2RAP15509 400 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 ICAM3P32942 547 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 ADCY7P51828 1080 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 CCL23P55773 120 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 PTPN11Q06124 597 aaPredicted RBP10.4□□□□□ -0.74
NDE1-207ENST00000573203 NEDD9Q14511 834 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 MFSD10Q14728 455 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 PPP1R18Q6NYC8 613 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 NLRX1Q86UT6 975 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 NOC4LQ9BVI4 516 aaKnown RBP10.4□□□□□ -0.74
NDE1-207ENST00000573203 KATNAL1Q9BW62 490 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 AGXT2Q9BYV1 514 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 PCDHA6Q9UN73 950 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 PCDHA8Q9Y5H6 950 aa10.4□□□□□ -0.74
NDE1-207ENST00000573203 SMCO2A6NFE2 343 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 SPATA31C2B4DYI2 1134 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 NOP56O00567 594 aaKnown RBP10.39□□□□□ -0.75
NDE1-207ENST00000573203 PPFIA4O75335 1185 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 ZNF286BP0CG31 522 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 ACRP10323 421 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 PSEN2P49810 448 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 AKAP17AQ02040 695 aaKnown RBP10.39□□□□□ -0.75
NDE1-207ENST00000573203 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 HSDL1Q3SXM5 330 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 CYFIP1Q7L576 1253 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 C7orf31Q8N865 590 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 KAT2BQ92831 832 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.39□□□□□ -0.755e-7■■□□□ 12.8
NDE1-207ENST00000573203 ALG1Q9BT22 464 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
NDE1-207ENST00000573203 TM6SF1Q9BZW5 370 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 GLT8D2Q9H1C3 349 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 IL23AQ9NPF7 189 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 RIC8AQ9NPQ8 531 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 BARHL2Q9NY43 387 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 NID2Q14112 1375 aa10.39□□□□□ -0.75
NDE1-207ENST00000573203 TRIP12Q14669 1992 aaPredicted RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 PRPF3O43395 683 aaKnown RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 F2P00734 622 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 FOSP01100 380 aaPredicted RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 HOXD8P13378 290 aaPredicted RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 SCG2P13521 617 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 PDIA3P30101 505 aaKnown RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 CCT2P78371 535 aaKnown RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 TOB2Q14106 344 aaPredicted RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 PTGISQ16647 500 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 PFKFB3Q16875 520 aaPredicted RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 KIAA0753Q2KHM9 967 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 TMEM240Q5SV17 173 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 PSRC1Q6PGN9 363 aaPredicted RBP10.38□□□□□ -0.75
NDE1-207ENST00000573203 METTL7BQ6UX53 244 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 ZNF365Q70YC5 407 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 Q7L0L9 218 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 SESTD1Q86VW0 696 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 TEX2Q8IWB9 1127 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 DEFB123Q8N688 67 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 RETREG2Q8NC44 543 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 PHKBQ93100 1093 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 GPRASP2Q96D09 838 aa10.38□□□□□ -0.75
NDE1-207ENST00000573203 SCLYQ96I15 445 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms