RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 ZNF215Q9UL58 517 aaPredicted RBP17.95■□□□□ 0.46
TSR1-202ENST00000571806 PRRC2BQ5JSZ5 2229 aaKnown RBP17.94■□□□□ 0.46
TSR1-202ENST00000571806 PDE4AP27815 886 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 MRPS9P82933 396 aaKnown RBP17.94■□□□□ 0.46
TSR1-202ENST00000571806 MBTPS1Q14703 1052 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 SLC35G1Q2M3R5 365 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 PLEKHG4Q58EX7 1191 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 KRT40Q6A162 431 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 DBF4BQ8NFT6 615 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 CTCFLQ8NI51 663 aaPredicted RBP17.94■□□□□ 0.46
TSR1-202ENST00000571806 IGDCC4Q8TDY8 1250 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 WNT8BQ93098 351 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 RRP36Q96EU6 259 aaKnown RBP17.94■□□□□ 0.46
TSR1-202ENST00000571806 SAMD11Q96NU1 681 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 SPZ1Q9BXG8 430 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 SUGCTQ9HAC7 445 aa17.94■□□□□ 0.46
TSR1-202ENST00000571806 LINC01553A4QN01 128 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 PIK3CDO00329 1044 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 SGSM2O43147 1006 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 DDAH1O94760 285 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 SMIM10L2AP0DMW4 78 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 SMIM10L2BP0DMW5 78 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 GNAQP50148 359 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 PCNX4Q63HM2 1172 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 TMCO2Q7Z6W1 182 aaPredicted RBP17.93■□□□□ 0.46
TSR1-202ENST00000571806 SMARCC2Q8TAQ2 1214 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 SEPT8Q92599 483 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 APBB2Q92870 758 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 MAP4K1Q92918 833 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 RNPEPQ9H4A4 650 aa17.93■□□□□ 0.46
TSR1-202ENST00000571806 SEC63Q9UGP8 760 aaKnown RBP17.93■□□□□ 0.46
TSR1-202ENST00000571806 SORBS3O60504 671 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 HTRA4P83105 476 aaPredicted RBP17.92■□□□□ 0.46
TSR1-202ENST00000571806 MKRN4PQ13434 485 aaPredicted RBP17.92■□□□□ 0.46
TSR1-202ENST00000571806 HIC1Q14526 733 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 TCTN1Q2MV58 587 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 CASC1Q6TDU7 716 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 CYFIP1Q7L576 1253 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 NLRX1Q86UT6 975 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 GPKOWQ92917 476 aaPredicted RBP eCLIP17.92■□□□□ 0.462e-6■■■■■ 39.1
TSR1-202ENST00000571806 CDHR1Q96JP9 859 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 GPR20Q99678 358 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 SENP2Q9HC62 589 aa17.92■□□□□ 0.46
TSR1-202ENST00000571806 COL4A4P53420 1690 aaPredicted RBP17.92■□□□□ 0.46
TSR1-202ENST00000571806 TCF20Q9UGU0 1960 aaKnown RBP17.91■□□□□ 0.46
TSR1-202ENST00000571806 SIP14410 1827 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 TREHO43280 583 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.91■□□□□ 0.46
TSR1-202ENST00000571806 MB21D2Q8IYB1 491 aaPredicted RBP17.91■□□□□ 0.46
TSR1-202ENST00000571806 ZNF654Q8IZM8 581 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 MYOCDQ8IZQ8 938 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 SP7Q8TDD2 431 aaPredicted RBP17.91■□□□□ 0.46
TSR1-202ENST00000571806 GDPD5Q8WTR4 605 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 TOP1MTQ969P6 601 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 NECAB3Q96P71 396 aaPredicted RBP17.91■□□□□ 0.46
TSR1-202ENST00000571806 RTEL1Q9NZ71 1219 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 MTUS1Q9ULD2 1270 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 NRCAMQ92823 1304 aa17.91■□□□□ 0.46
TSR1-202ENST00000571806 CALM1P0DP23 149 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 CALM2P0DP24 149 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 CALM3P0DP25 149 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 PTPROQ16827 1216 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 FAM117BQ6P1L5 589 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 SPRED2Q7Z698 418 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 FBXO22Q8NEZ5 403 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 ZFP91Q96JP5 570 aaPredicted RBP17.9■□□□□ 0.46
TSR1-202ENST00000571806 TMEM87BQ96K49 555 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 LY9Q9HBG7 655 aa17.9■□□□□ 0.46
TSR1-202ENST00000571806 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.89■□□□□ 0.45
TSR1-202ENST00000571806 MEIS2O14770 477 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 MAFGO15525 162 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 RPLP2P05387 115 aaKnown RBP17.89■□□□□ 0.45
TSR1-202ENST00000571806 MCM5P33992 734 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 ANTXR2P58335 489 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 FAM26DQ5JW98 314 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 RPAINQ86UA6 219 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 GPRASP2Q96D09 838 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 SETD4Q9NVD3 440 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 MICAL3Q7RTP6 2002 aa17.89■□□□□ 0.45
TSR1-202ENST00000571806 BAZ2BQ9UIF8 2168 aaKnown RBP17.89■□□□□ 0.45
TSR1-202ENST00000571806 CCDC69A6NI79 296 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 ADAM17P78536 824 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 SEMA3FQ13275 785 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 TAF2Q6P1X5 1199 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 USP17L6PQ6QN14 398 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 NFXL1Q6ZNB6 911 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 TEX2Q8IWB9 1127 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 PIBF1Q8WXW3 757 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 MRPL38Q96DV4 380 aaKnown RBP17.88■□□□□ 0.45
TSR1-202ENST00000571806 YME1L1Q96TA2 773 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 BCAS3Q9H6U6 928 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 PSTPIP2Q9H939 334 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 SUPT16HQ9Y5B9 1047 aaKnown RBP17.88■□□□□ 0.45
TSR1-202ENST00000571806 RBM8AQ9Y5S9 174 aaKnown RBP17.88■□□□□ 0.45
TSR1-202ENST00000571806 NCOR1O75376 2440 aa17.88■□□□□ 0.45
TSR1-202ENST00000571806 BDP1A6H8Y1 2624 aa17.87■□□□□ 0.45
TSR1-202ENST00000571806 COL4A6Q14031 1691 aa17.87■□□□□ 0.45
TSR1-202ENST00000571806 LIFRP42702 1097 aa17.87■□□□□ 0.45
TSR1-202ENST00000571806 ARHGAP4P98171 946 aa17.87■□□□□ 0.45
TSR1-202ENST00000571806 PUS10Q3MIT2 529 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms