RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 RNF26Q9BY78 433 aaPredicted RBP16.65■□□□□ 0.26
LITAF-208ENST00000571627 EHMT1Q9H9B1 1298 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 HDAC6Q9UBN7 1215 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 NOD1Q9Y239 953 aa16.65■□□□□ 0.26
LITAF-208ENST00000571627 LGALS2P05162 132 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 KCNA2P16389 499 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 ZNF365Q70YC5 407 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 SESTD1Q86VW0 696 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 C7orf31Q8N865 590 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 CYP2W1Q8TAV3 490 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 ZNF274Q96GC6 653 aaPredicted RBP16.64■□□□□ 0.25
LITAF-208ENST00000571627 CTAGE1Q96RT6 745 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 GPR20Q99678 358 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 IL23AQ9NPF7 189 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 GTF2IRD1Q9UHL9 959 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 GBF1Q92538 1859 aa16.64■□□□□ 0.25
LITAF-208ENST00000571627 ESYT2A0FGR8 921 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 RBAK-RBAKDNI3L0D1 243 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 DTNBO60941 627 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 FOSP01100 380 aaPredicted RBP16.63■□□□□ 0.25
LITAF-208ENST00000571627 ZNF200P98182 395 aaPredicted RBP16.63■□□□□ 0.25
LITAF-208ENST00000571627 AP3B2Q13367 1082 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 HIC1Q14526 733 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 VWCEQ96DN2 955 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 SENP7Q9BQF6 1050 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 ZMYND12Q9H0C1 365 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 GLT8D2Q9H1C3 349 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 JADE2Q9NQC1 790 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 VPS54Q9P1Q0 977 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 TET1Q8NFU7 2136 aa16.63■□□□□ 0.25
LITAF-208ENST00000571627 H3BRB1 525 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 CPLX1O14810 134 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 SREBF1P36956 1147 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 ANKRD1Q15327 319 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 UTP14CQ5TAP6 766 aaKnown RBP16.62■□□□□ 0.25
LITAF-208ENST00000571627 FAM109BQ6ICB4 259 aaPredicted RBP16.62■□□□□ 0.25
LITAF-208ENST00000571627 PSRC1Q6PGN9 363 aaPredicted RBP16.62■□□□□ 0.25
LITAF-208ENST00000571627 DEFB128Q7Z7B8 93 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 TEX2Q8IWB9 1127 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 DEFB123Q8N688 67 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 RASGRP4Q8TDF6 673 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 CCDC12Q8WUD4 166 aaPredicted RBP16.62■□□□□ 0.25
LITAF-208ENST00000571627 DHX38Q92620 1227 aaKnown RBP16.62■□□□□ 0.25
LITAF-208ENST00000571627 CDHR1Q96JP9 859 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 MXRA8Q9BRK3 442 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 TUT1Q9H6E5 874 aaKnown RBP16.62■□□□□ 0.25
LITAF-208ENST00000571627 C6orf50Q9HD87 102 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 KCNH7Q9NS40 1196 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 KAT6AQ92794 2004 aa16.62■□□□□ 0.25
LITAF-208ENST00000571627 ARP10275 920 aa16.61■□□□□ 0.25
LITAF-208ENST00000571627 AK2P54819 239 aa16.61■□□□□ 0.25
LITAF-208ENST00000571627 ARHGAP4P98171 946 aa16.61■□□□□ 0.25
LITAF-208ENST00000571627 SSRP1Q08945 709 aaKnown RBP16.61■□□□□ 0.25
LITAF-208ENST00000571627 CEP55Q53EZ4 464 aa16.61■□□□□ 0.25
LITAF-208ENST00000571627 GPR153Q6NV75 609 aa16.61■□□□□ 0.25
LITAF-208ENST00000571627 TRIM22Q8IYM9 498 aa16.61■□□□□ 0.25
LITAF-208ENST00000571627 REXO1Q8N1G1 1221 aaKnown RBP16.61■□□□□ 0.25
LITAF-208ENST00000571627 GIMAP8Q8ND71 665 aaPredicted RBP16.61■□□□□ 0.25
LITAF-208ENST00000571627 AIFM3Q96NN9 605 aa16.61■□□□□ 0.25
LITAF-208ENST00000571627 CXXC1Q9P0U4 656 aaPredicted RBP16.61■□□□□ 0.25
LITAF-208ENST00000571627 GTF3C3Q9Y5Q9 886 aa16.61■□□□□ 0.25
LITAF-208ENST00000571627 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 SMIM10L2AP0DMW4 78 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 SMIM10L2BP0DMW5 78 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 TCF7P36402 384 aaPredicted RBP16.6■□□□□ 0.25
LITAF-208ENST00000571627 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
LITAF-208ENST00000571627 SCRN1Q12765 414 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 BFSP2Q13515 415 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 RASIP1Q5U651 963 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 OTOP2Q7RTS6 562 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 CCDC148Q8NFR7 591 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 WNT8BQ93098 351 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 FAM161BQ96MY7 647 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
LITAF-208ENST00000571627 GSTTP1A0A1W2PQM5 241 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 GRXCR1A8MXD5 290 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 FAM86B1E9PN63 330 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 FGBP02675 491 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 FAM86B2P0C5J1 330 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 GNA11P29992 359 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 ZNF76P36508 570 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 CPLX2Q6PUV4 134 aaKnown RBP16.59■□□□□ 0.25
LITAF-208ENST00000571627 CCDC155Q8N6L0 562 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 CRYGNQ8WXF5 182 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 HERVK_113Q902F9 699 aa16.59■□□□□ 0.25
LITAF-208ENST00000571627 SLKQ9H2G2 1235 aaPredicted RBP16.59■□□□□ 0.25
LITAF-208ENST00000571627 UPF2Q9HAU5 1272 aaKnown RBP16.59■□□□□ 0.25
LITAF-208ENST00000571627 AGO4Q9HCK5 861 aaKnown RBP16.59■□□□□ 0.25
LITAF-208ENST00000571627 C17orf102A2RUQ5 167 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 MEIS1O00470 390 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 MAFGO15525 162 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 DEXIO95424 95 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 LARGE1O95461 756 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 MARK3P27448 753 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 NLRP5P59047 1200 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 PTK7Q13308 1070 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms