RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 LRRC8DQ7L1W4 858 aa15.8■□□□□ 0.12
RAB40B-204ENST00000571554 CAGE1Q8TC20 777 aa15.8■□□□□ 0.12
RAB40B-204ENST00000571554 RBM28Q9NW13 759 aaKnown RBP15.8■□□□□ 0.12
RAB40B-204ENST00000571554 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
RAB40B-204ENST00000571554 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
RAB40B-204ENST00000571554 SNX14Q9Y5W7 946 aa15.8■□□□□ 0.12
RAB40B-204ENST00000571554 V9GY48 417 aaPredicted RBP15.8■□□□□ 0.12
RAB40B-204ENST00000571554 MYO9BQ13459 2157 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 PTPRSQ13332 1948 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 SPDYE3A6NKU9 549 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 H3BRB1 525 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 ATP9AO75110 1047 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 PPFIA3O75145 1194 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 ACTN1P12814 892 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 SELPP16109 830 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 FUT2Q10981 343 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 NEDD9Q14511 834 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 TCTN1Q2MV58 587 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 Q6ZUG5 572 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.79■□□□□ 0.12
RAB40B-204ENST00000571554 AFAP1L1Q8TED9 768 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 GPR20Q99678 358 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 TUT1Q9H6E5 874 aaKnown RBP15.79■□□□□ 0.12
RAB40B-204ENST00000571554 FAM217BQ9NTX9 383 aaPredicted RBP15.79■□□□□ 0.12
RAB40B-204ENST00000571554 PRUNE2Q8WUY3 3088 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 A0A0C4DFX4 3053 aa15.79■□□□□ 0.12
RAB40B-204ENST00000571554 DLL1O00548 723 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 NBNO60934 754 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 NEFLP07196 543 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 SMIM10L2AP0DMW4 78 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 SMIM10L2BP0DMW5 78 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 ITGB5P18084 799 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 HSPA4P34932 840 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 ADD1P35611 737 aaKnown RBP15.78■□□□□ 0.12
RAB40B-204ENST00000571554 PTK7Q13308 1070 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 TRIM71Q2Q1W2 868 aaKnown RBP15.78■□□□□ 0.12
RAB40B-204ENST00000571554 ZNF618Q5T7W0 954 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 TMCO2Q7Z6W1 182 aaPredicted RBP15.78■□□□□ 0.12
RAB40B-204ENST00000571554 NLRX1Q86UT6 975 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 PPM1EQ8WY54 764 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 BRF1Q92994 677 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 SLC28A3Q9HAS3 691 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 TMEM260Q9NX78 707 aa15.78■□□□□ 0.12
RAB40B-204ENST00000571554 C17orf102A2RUQ5 167 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 STXBP3O00186 592 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 TREHO43280 583 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 HMGB1P09429 215 aaKnown RBP15.77■□□□□ 0.12
RAB40B-204ENST00000571554 KCNA2P16389 499 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 THPOP40225 353 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 METAP2P50579 478 aaKnown RBP eCLIP15.77■□□□□ 0.12
RAB40B-204ENST00000571554 PPP2R2DQ66LE6 453 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 XRRA1Q6P2D8 792 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 BLOC1S2Q6QNY1 142 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 USP38Q8NB14 1042 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 KCNB2Q92953 911 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 ATP6V0A1Q93050 837 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 CERS4Q9HA82 394 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 SETD4Q9NVD3 440 aa15.77■□□□□ 0.12
RAB40B-204ENST00000571554 CHD7Q9P2D1 2997 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 CA3P07451 260 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 IGFBP4P22692 258 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 MARK3P27448 753 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 ADCY7P51828 1080 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 RBL2Q08999 1139 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 MTMR1Q13613 665 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 MBTPS1Q14703 1052 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 TRAF7Q6Q0C0 670 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 CYP2W1Q8TAV3 490 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 GPRASP2Q96D09 838 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 GAS2L1Q99501 681 aaPredicted RBP15.76■□□□□ 0.11
RAB40B-204ENST00000571554 USP26Q9BXU7 913 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 RNPEPQ9H4A4 650 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 PCDHA11Q9Y5I1 949 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 UBIAD1Q9Y5Z9 338 aa15.76■□□□□ 0.11
RAB40B-204ENST00000571554 SMCO2A6NFE2 343 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 ADAMTS3O15072 1205 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 ARHGEF15O94989 841 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 CTSHP09668 335 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 RPS6KB1P23443 525 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 TCF7P36402 384 aaPredicted RBP15.75■□□□□ 0.11
RAB40B-204ENST00000571554 DEFB103AP81534 67 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 ADGRE1Q14246 886 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 SERINC5Q86VE9 423 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 SLC9A7Q96T83 725 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 SENP7Q9BQF6 1050 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 ANO3Q9BYT9 981 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 RIC8AQ9NPQ8 531 aa15.75■□□□□ 0.11
RAB40B-204ENST00000571554 GSTTP1A0A1W2PQM5 241 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 RFXAPO00287 272 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 REC8O95072 547 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 KCNJ6P48051 423 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 WDR5P61964 334 aaKnown RBP15.74■□□□□ 0.11
RAB40B-204ENST00000571554 ARHGAP4P98171 946 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 CCDC85BQ15834 202 aaPredicted RBP15.74■□□□□ 0.11
RAB40B-204ENST00000571554 PPP1R18Q6NYC8 613 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 CNKSR3Q6P9H4 555 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 HERC6Q8IVU3 1022 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 PHKBQ93100 1093 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 UIMC1Q96RL1 719 aa15.74■□□□□ 0.11
RAB40B-204ENST00000571554 OSBPL7Q9BZF2 842 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms