RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	AFG1L	Q8WV93	481 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	EMID1	Q96A84	441 aa	Predicted RBP	13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	FERMT2	Q96AC1	680 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SPATA33	Q96N06	139 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	FOXP1	Q9H334	677 aa	Predicted RBP	13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	BCAS3	Q9H6U6	928 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MLXIP	Q9HAP2	919 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845	PHF24	Q9UPV7	400 aa		13.14	□□□□□ -0.31
ATP2A3-208	ENST00000570845		A0A1W2PQ45	241 aa	Predicted RBP	13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845		A0A1W2PQY0	241 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MOXD2P	A6NHM9	499 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845		A6NJR5	290 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	KIF28P	B7ZC32	967 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MMP3	P08254	477 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MYL3	P08590	195 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	COL6A1	P12109	1028 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SP4	Q02446	784 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MCTP1	Q6DN14	999 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MOXD1	Q6UVY6	613 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	NOSTRIN	Q8IVI9	506 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	PPTC7	Q8NI37	304 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	UIMC1	Q96RL1	719 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	NAP1L4	Q99733	375 aa	Known RBP	13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SENP7	Q9BQF6	1050 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ZNF577	Q9BSK1	485 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	AGO4	Q9HCK5	861 aa	Known RBP	13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SI	P14410	1827 aa		13.13	□□□□□ -0.31
ATP2A3-208	ENST00000570845	NOP56	O00567	594 aa	Known RBP	13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	CCNT1	O60563	726 aa	Known RBP	13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	GCFC2	P16383	781 aa	Known RBP	13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	PDC	P20941	246 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	HSDL1	Q3SXM5	330 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845		Q4G0T1	1027 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	METTL7B	Q6UX53	244 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SPRYD3	Q8NCJ5	442 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	LENG9	Q96B70	501 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SDF4	Q9BRK5	362 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	POLR3E	Q9NVU0	708 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	DDX25	Q9UHL0	483 aa	Known RBP	13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	NFASC	O94856	1347 aa		13.12	□□□□□ -0.31
ATP2A3-208	ENST00000570845	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	VPS37C	A5D8V6	355 aa	Predicted RBP	13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	DDX39A	O00148	427 aa	Known RBP	13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	IPO5	O00410	1097 aa	Known RBP	13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MSH4	O15457	936 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SLC37A4	O43826	429 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	KPNA6	O60684	536 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	CYP3A7	P24462	503 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	U2AF2	P26368	475 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	RGS19	P49795	217 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	PURA	Q00577	322 aa	Known RBP	13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ITGB3BP	Q13352	177 aa	Predicted RBP	13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	BECN1	Q14457	450 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	DGKD	Q16760	1214 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	PPP4R3A	Q6IN85	833 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	CXCL17	Q6UXB2	119 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	VTI1A	Q96AJ9	217 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	GLT1D1	Q96MS3	346 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MBOAT7	Q96N66	472 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	JPH1	Q9HDC5	661 aa	Predicted RBP	13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	STARD7	Q9NQZ5	370 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SLC9A2	Q9UBY0	812 aa		13.11	□□□□□ -0.31
ATP2A3-208	ENST00000570845	CABYR	O75952	493 aa		13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ZNF286B	P0CG31	522 aa		13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ATP2B1	P20020	1258 aa		13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SYT1	P21579	422 aa		13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ATN1	P54259	1190 aa	Predicted RBP	13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	GPR20	Q99678	358 aa		13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	MTG1	Q9BT17	334 aa	Predicted RBP	13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	HTATIP2	Q9BUP3	242 aa		13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	TBC1D22B	Q9NU19	505 aa		13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	NOL7	Q9UMY1	257 aa	Known RBP	13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	TELO2	Q9Y4R8	837 aa		13.1	□□□□□ -0.31
ATP2A3-208	ENST00000570845	WNT7A	O00755	349 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	DHX15	O43143	795 aa	Known RBP	13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	HOXD8	P13378	290 aa	Predicted RBP	13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	CHMP4BP1	P59074	171 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	PSMC6	P62333	389 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SLC39A5	Q6ZMH5	540 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	POTED	Q86YR6	584 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ETNPPL	Q8TBG4	499 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	SLC5A5	Q92911	643 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	GJA10	Q969M2	543 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	TCEAL9	Q9UHQ7	104 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845	ELP1	O95163	1332 aa		13.09	□□□□□ -0.31
ATP2A3-208	ENST00000570845		A0A0U1RQG5	324 aa	Predicted RBP	13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	GSTTP1	A0A1W2PQM5	241 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	MARCH6	O60337	910 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	NEMF	O60524	1076 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	GAS7	O60861	476 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	PPFIA4	O75335	1185 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	LGALS2	P05162	132 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	MCM7	P33993	719 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	TCF7	P36402	384 aa	Predicted RBP	13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	ACTR2	P61160	394 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	ITGA7	Q13683	1181 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	LRRC26	Q2I0M4	334 aa		13.08	□□□□□ -0.32
ATP2A3-208	ENST00000570845	TTC38	Q5R3I4	469 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms