RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 NASPP49321 788 aaPredicted RBP7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 CNTN2Q02246 1040 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 MTMR1Q13613 665 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 PWP2Q15269 919 aaKnown RBP7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 ZNF174Q15697 407 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 CEP55Q53EZ4 464 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 PPP4R3AQ6IN85 833 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 FAM133AQ8N9E0 248 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 RASSF8Q8NHQ8 419 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 CDHR1Q96JP9 859 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 FTOQ9C0B1 505 aaKnown RBP eCLIP7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 RTEL1Q9NZ71 1219 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 PCDHB6Q9Y5E3 794 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 CLIC4Q9Y696 253 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
CTDNEP1-204ENST00000570484 RLFQ13129 1914 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 DNAJC25-GNG10A0A024R161 153 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 SLC37A4O43826 429 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 GAS7O60861 476 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 GNRH1P01148 92 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 CYP3A4P08684 503 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 ATP2C1P98194 919 aaPredicted RBP7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 MORN1Q5T089 497 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 SWT1Q5T5J6 900 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 ARMCX2Q7L311 632 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 NIPA1Q7RTP0 329 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 PLA2G4DQ86XP0 818 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 TRMT44Q8IYL2 757 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 SLFN12Q8IYM2 578 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 IL31RAQ8NI17 732 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 CD99L2Q8TCZ2 262 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 LEO1Q8WVC0 666 aaPredicted RBP7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 FERMT2Q96AC1 680 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 GPRASP2Q96D09 838 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 PURBQ96QR8 312 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 MXRA8Q9BRK3 442 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 ZNF577Q9BSK1 485 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 GDPD2Q9HCC8 539 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 PKD2L1Q9P0L9 805 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 TFIP11Q9UBB9 837 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 DIS3Q9Y2L1 958 aaKnown RBP7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 MRVI1Q9Y6F6 885 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 ELP1O95163 1332 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 SYNGAP1Q96PV0 1343 aa7.44□□□□□ -1.22
CTDNEP1-204ENST00000570484 COL11A1P12107 1806 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 MYH6P13533 1939 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 VWA3AA6NCI4 1184 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 SOWAHBA6NEL2 793 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 FAM86B1E9PN63 330 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 TBX3O15119 743 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 COBLO75128 1261 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 PPP6R2O75170 966 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 EIF3JO75822 258 aaKnown RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 FAM86B2P0C5J1 330 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 CYP2B6P20813 491 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 EDNRBP24530 442 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 MARCKSP29966 332 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 CIITAP33076 1130 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 PRPHP41219 470 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 TXKP42681 527 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 TOB1P50616 345 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 PRKCZQ05513 592 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 SLC39A14Q15043 492 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 ZNF792Q3KQV3 632 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 Q4G0T1 1027 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 LRCH2Q5VUJ6 765 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 MFSD14CQ5VZR4 134 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 ARL6IP4Q66PJ3 421 aaKnown RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 HAUS3Q68CZ6 603 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 DTHD1Q6ZMT9 781 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 CCDC73Q6ZRK6 1079 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 SEPT14Q6ZU15 432 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 FBXO16Q8IX29 292 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 MSL3Q8N5Y2 521 aaKnown RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 LINC00301Q8NCQ3 95 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 RAET1EQ8TD07 263 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 ZNF296Q8WUU4 475 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 MAML3Q96JK9 1138 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 TRIM47Q96LD4 638 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 FAM20AQ96MK3 541 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 SDF4Q9BRK5 362 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 TEKT3Q9BXF9 490 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 ARHGAP39Q9C0H5 1083 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 R3HDMLQ9H3Y0 253 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 VTA1Q9NP79 307 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 ZHX1Q9UKY1 873 aaPredicted RBP7.43□□□□□ -1.22
CTDNEP1-204ENST00000570484 CYP3A7-CYP3A51PA0A087WV96 503 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 DDX39AO00148 427 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 IPO5O00410 1097 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 WNT7AO00755 349 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 MAFGO15525 162 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CHMP2AO43633 222 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CUTAO60888 179 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 HOXC6P09630 235 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 CYP3A7P24462 503 aa7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 LONP1P36776 959 aaKnown RBP7.42□□□□□ -1.22
CTDNEP1-204ENST00000570484 FLT3LGP49771 235 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms