RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CCDC12Q8WUD4 166 aaPredicted RBP14.91□□□□□ -0.02
CNOT1-220ENST00000569916 CDHR1Q96JP9 859 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 CTAGE1Q96RT6 745 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 ALG1Q9BT22 464 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 JADE2Q9NQC1 790 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 GTF2IRD1Q9UHL9 959 aa14.91□□□□□ -0.02
CNOT1-220ENST00000569916 NOP56O00567 594 aaKnown RBP14.9□□□□□ -0.02
CNOT1-220ENST00000569916 LGALS2P05162 132 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 AK2P54819 239 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 C8orf34Q49A92 452 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 JAKMIP3Q5VZ66 844 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 C16orf59Q7L2K0 433 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 GPR20Q99678 358 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.9□□□□□ -0.02
CNOT1-220ENST00000569916 MXRA8Q9BRK3 442 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 C6orf50Q9HD87 102 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 VPS54Q9P1Q0 977 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 HDAC6Q9UBN7 1215 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 TPCN1Q9ULQ1 816 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 GBF1Q92538 1859 aa14.9□□□□□ -0.02
CNOT1-220ENST00000569916 CPLX1O14810 134 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 MAFGO15525 162 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 CCL23P55773 120 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 SP4Q02446 784 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 SSRP1Q08945 709 aaKnown RBP14.89□□□□□ -0.03
CNOT1-220ENST00000569916 SCRN1Q12765 414 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 PTGISQ16647 500 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 TMEM240Q5SV17 173 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 GPR153Q6NV75 609 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 TRIM22Q8IYM9 498 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 REXO1Q8N1G1 1221 aaKnown RBP14.89□□□□□ -0.03
CNOT1-220ENST00000569916 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 GIMAP8Q8ND71 665 aaPredicted RBP14.89□□□□□ -0.03
CNOT1-220ENST00000569916 CCDC148Q8NFR7 591 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 CYP2W1Q8TAV3 490 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 CRYGNQ8WXF5 182 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 RNPC3Q96LT9 517 aaKnown RBP14.89□□□□□ -0.03
CNOT1-220ENST00000569916 IL23AQ9NPF7 189 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 PKD2L1Q9P0L9 805 aa14.89□□□□□ -0.03
CNOT1-220ENST00000569916 H3BRB1 525 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 PITPNM1O00562 1244 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 PFKFB2O60825 505 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 DEXIO95424 95 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 ACRP10323 421 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 GNA11P29992 359 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 ARHGAP4P98171 946 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 HIC1Q14526 733 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 CEP55Q53EZ4 464 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 PSRC1Q6PGN9 363 aaPredicted RBP14.88□□□□□ -0.03
CNOT1-220ENST00000569916 TRIM50Q86XT4 487 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 RASGRP4Q8TDF6 673 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 DHX38Q92620 1227 aaKnown RBP14.88□□□□□ -0.03
CNOT1-220ENST00000569916 VWCEQ96DN2 955 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 SCLYQ96I15 445 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 TUT1Q9H6E5 874 aaKnown RBP14.88□□□□□ -0.03
CNOT1-220ENST00000569916 SH3GLB2Q9NR46 395 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 KCNH7Q9NS40 1196 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 NOD1Q9Y239 953 aa14.88□□□□□ -0.03
CNOT1-220ENST00000569916 MEIS1O00470 390 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 ARP10275 920 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 HOXC8P31273 242 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 ANKRD1Q15327 319 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 RASIP1Q5U651 963 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 MCTP2Q6DN12 878 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 CPLX2Q6PUV4 134 aaKnown RBP14.87□□□□□ -0.03
CNOT1-220ENST00000569916 ZNF365Q70YC5 407 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 BICD2Q8TD16 824 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 SLKQ9H2G2 1235 aaPredicted RBP14.87□□□□□ -0.03
CNOT1-220ENST00000569916 STK36Q9NRP7 1315 aa14.87□□□□□ -0.03
CNOT1-220ENST00000569916 WDR81Q562E7 1941 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 IGLV3-22A0A075B6J6 115 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 GSTTP1A0A1W2PQM5 241 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 FAM86B1E9PN63 330 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 LARGE1O95461 756 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 CYP3A4P08684 503 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 FAM86B2P0C5J1 330 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 TCF7P36402 384 aaPredicted RBP14.86□□□□□ -0.03
CNOT1-220ENST00000569916 ZNF200P98182 395 aaPredicted RBP14.86□□□□□ -0.03
CNOT1-220ENST00000569916 RBL2Q08999 1139 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 ITGB3BPQ13352 177 aaPredicted RBP14.86□□□□□ -0.03
CNOT1-220ENST00000569916 BFSP2Q13515 415 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 UTP14CQ5TAP6 766 aaKnown RBP14.86□□□□□ -0.03
CNOT1-220ENST00000569916 NIPA1Q7RTP0 329 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 CAGE1Q8TC20 777 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 AIFM3Q96NN9 605 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 AGO4Q9HCK5 861 aaKnown RBP14.86□□□□□ -0.03
CNOT1-220ENST00000569916 JPH1Q9HDC5 661 aaPredicted RBP14.86□□□□□ -0.03
CNOT1-220ENST00000569916 SIP14410 1827 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 NFASCO94856 1347 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 PTPRSQ13332 1948 aa14.86□□□□□ -0.03
CNOT1-220ENST00000569916 KAT6AQ92794 2004 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 LAMA2P24043 3122 aaKnown RBP14.85□□□□□ -0.03
CNOT1-220ENST00000569916 CDKL5O76039 1030 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 CTDNEP1O95476 244 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 IQCF3P0C7M6 154 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 SMIM10L2AP0DMW4 78 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 SMIM10L2BP0DMW5 78 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 ZNF76P36508 570 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 NEK4P51957 841 aa14.85□□□□□ -0.03
CNOT1-220ENST00000569916 NLRP5P59047 1200 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms