RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 HERVK_113Q902F9 699 aa8.41□□□□□ -1.06
CNOT1-218ENST00000569732 LENG1Q96BZ8 264 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-218ENST00000569732 CCDC17Q96LX7 622 aa8.41□□□□□ -1.06
CNOT1-218ENST00000569732 IL23AQ9NPF7 189 aa8.41□□□□□ -1.06
CNOT1-218ENST00000569732 DCP1AQ9NPI6 582 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-218ENST00000569732 ZHX1Q9UKY1 873 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-218ENST00000569732 HCN4Q9Y3Q4 1203 aa8.41□□□□□ -1.06
CNOT1-218ENST00000569732 MYH8P13535 1937 aa8.41□□□□□ -1.06
CNOT1-218ENST00000569732 CCDC171Q6TFL3 1326 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 RAD50Q92878 1312 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 HIP1O00291 1037 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 SGSM2O43147 1006 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 FGBP02675 491 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 C6orf222P0C671 652 aaPredicted RBP8.4□□□□□ -1.06
CNOT1-218ENST00000569732 BMP1P13497 986 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 TIMP2P16035 220 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 MAPK1P28482 360 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 GJA9P57773 515 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 NKX3-2P78367 333 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 RELBQ01201 579 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 CCDC85BQ15834 202 aaPredicted RBP8.4□□□□□ -1.06
CNOT1-218ENST00000569732 CWC27Q6UX04 472 aaKnown RBP8.4□□□□□ -1.06
CNOT1-218ENST00000569732 SIAH1Q8IUQ4 282 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 REPS2Q8NFH8 660 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 DDX11Q96FC9 970 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 TEX13BQ9BXU2 312 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 SEZ6LQ9BYH1 1024 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 SAP130Q9H0E3 1048 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 UPF3AQ9H1J1 476 aaKnown RBP8.4□□□□□ -1.06
CNOT1-218ENST00000569732 NKX2-4Q9H2Z4 354 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 ABHD16BQ9H3Z7 469 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 ZNF395Q9H8N7 513 aaPredicted RBP8.4□□□□□ -1.06
CNOT1-218ENST00000569732 DIAPH3Q9NSV4 1193 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 TOR4AQ9NXH8 423 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 PPP1R9AQ9ULJ8 1098 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 USP3Q9Y6I4 520 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 MYH7P12883 1935 aa8.4□□□□□ -1.06
CNOT1-218ENST00000569732 ZNFX1Q9P2E3 1918 aaKnown RBP8.4□□□□□ -1.06
CNOT1-218ENST00000569732 DNAJC25-GNG10A0A024R161 153 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 ANKRD33BA6NCL7 494 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 SMIM22K7EJ46 135 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 CDC45O75419 566 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 SNAI1O95863 264 aaPredicted RBP8.39□□□□□ -1.07
CNOT1-218ENST00000569732 CD4P01730 458 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 ACRP10323 421 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 CYP2D6P10635 497 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 AKR1B1P15121 316 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 NPR3P17342 541 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 SMPD1P17405 629 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 ARHGAP4P98171 946 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 ACVR2BQ13705 512 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 GIMAP6Q6P9H5 292 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 AMOTL1Q8IY63 956 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 KANSL2Q9H9L4 492 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 ATP8A2Q9NTI2 1148 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 FBXO28Q9NVF7 368 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 DCTN4Q9UJW0 460 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 SLC4A4Q9Y6R1 1079 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 REV3LO60673 3130 aa8.39□□□□□ -1.07
CNOT1-218ENST00000569732 ZMYM6O95789 1325 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 RBM47A0AV96 593 aaKnown RBP8.38□□□□□ -1.07
CNOT1-218ENST00000569732 SERTM1A2A2V5 107 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 MYADML2A6NDP7 307 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 ATP2A1O14983 1001 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 CABYRO75952 493 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 HSPD1P10809 573 aaKnown RBP8.38□□□□□ -1.07
CNOT1-218ENST00000569732 EEF2P13639 858 aaKnown RBP8.38□□□□□ -1.07
CNOT1-218ENST00000569732 GNAT2P19087 354 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-218ENST00000569732 NOS2P35228 1153 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 TEAD4Q15561 434 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 ALX1Q15699 326 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 SBK1Q52WX2 424 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 GNASQ5JWF2 1037 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 COX20Q5RI15 118 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 SNRNP48Q6IEG0 339 aaKnown RBP8.38□□□□□ -1.07
CNOT1-218ENST00000569732 CTR9Q6PD62 1173 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 RPUSD2Q8IZ73 545 aaKnown RBP8.38□□□□□ -1.07
CNOT1-218ENST00000569732 IFNL3Q8IZI9 196 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 SLC43A3Q8NBI5 491 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 HIPK3Q9H422 1215 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 FBXO40Q9UH90 709 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 ZNF232Q9UNY5 417 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 COG5Q9UP83 839 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 YBX2Q9Y2T7 364 aaKnown RBP8.38□□□□□ -1.07
CNOT1-218ENST00000569732 PCDHA11Q9Y5I1 949 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 GBF1Q92538 1859 aa8.38□□□□□ -1.07
CNOT1-218ENST00000569732 SMCHD1A6NHR9 2005 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 CYP2D7A0A087X1C5 515 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 PFKMP08237 780 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 CYP2C18P33260 490 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 CDK8P49336 464 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 PTH1RQ03431 593 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 CCDC144BQ3MJ40 725 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 TMEM31Q5JXX7 168 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 FAM83BQ5T0W9 1011 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 C12orf60Q5U649 245 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 C16orf86Q6ZW13 317 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 OTOP2Q7RTS6 562 aa8.37□□□□□ -1.07
CNOT1-218ENST00000569732 CLEC10AQ8IUN9 316 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms