RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 NOP56O00567 594 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-218ENST00000569569 ATP9AO75110 1047 aa15.77■□□□□ 0.12
HERPUD1-218ENST00000569569 RBM25P49756 843 aaKnown RBP15.77■□□□□ 0.12
HERPUD1-218ENST00000569569 CEP55Q53EZ4 464 aa15.77■□□□□ 0.12
HERPUD1-218ENST00000569569 FAM47CQ5HY64 1035 aa15.77■□□□□ 0.12
HERPUD1-218ENST00000569569 TRPV6Q9H1D0 765 aa15.77■□□□□ 0.12
HERPUD1-218ENST00000569569 MYH9P35579 1960 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 STK36Q9NRP7 1315 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 ADAMTS3O15072 1205 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 F2P00734 622 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 CYP3A4P08684 503 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 KCNA2P16389 499 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 ZNF76P36508 570 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 PSEN2P49810 448 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 CHMP4BP1P59074 171 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 ARHGAP4P98171 946 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 SESTD1Q86VW0 696 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 TDHQ8IZJ6 230 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 CYP2W1Q8TAV3 490 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 GTF3C6Q969F1 213 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 KIF2CQ99661 725 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 GPR20Q99678 358 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 KCNH7Q9NS40 1196 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 TRMT13Q9NUP7 481 aaKnown RBP15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 WDR81Q562E7 1941 aa15.76■□□□□ 0.11
HERPUD1-218ENST00000569569 HAS3O00219 553 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 MEIS1O00470 390 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 LARGE1O95461 756 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 CTDNEP1O95476 244 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 ZNF286BP0CG31 522 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 XBP1P17861 261 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 MFSD10Q14728 455 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 KIAA0753Q2KHM9 967 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 GALNT17Q6IS24 598 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 MFSD5Q6N075 450 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 NIPA1Q7RTP0 329 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 NECAB1Q8N987 351 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 CRYGNQ8WXF5 182 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 AIFM3Q96NN9 605 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 C16orf70Q9BSU1 422 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 ALG1Q9BT22 464 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 UPF2Q9HAU5 1272 aaKnown RBP15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 PCDHA4Q9UN74 947 aa15.75■□□□□ 0.11
HERPUD1-218ENST00000569569 H3BRB1 525 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 LGALS2P05162 132 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 ARP10275 920 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 FPGSQ05932 587 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 BLIDQ8IZY5 108 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 TMEM199Q8N511 208 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 C7orf31Q8N865 590 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 RASGRP4Q8TDF6 673 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 PPP1R13LQ8WUF5 828 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 WASF1Q92558 559 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 PPP1R12CQ9BZL4 782 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 HIPK3Q9H422 1215 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 TUT1Q9H6E5 874 aaKnown RBP15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 ORC3Q9UBD5 711 aaPredicted RBP15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 LIMCH1Q9UPQ0 1083 aa15.74■□□□□ 0.11
HERPUD1-218ENST00000569569 SCN5AQ14524 2016 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 NFASCO94856 1347 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 FAM86B1E9PN63 330 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 FAM86B2P0C5J1 330 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 CYP2C18P33260 490 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 SP4Q02446 784 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 PLA2G4DQ86XP0 818 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 DAGLBQ8NCG7 672 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 SEPT1Q8WYJ6 367 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 NOC4LQ9BVI4 516 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 AGO4Q9HCK5 861 aaKnown RBP15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 HDAC6Q9UBN7 1215 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 GTF2IRD1Q9UHL9 959 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 NOD1Q9Y239 953 aa15.73■□□□□ 0.11
HERPUD1-218ENST00000569569 M0R2N6 131 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 CYP2C9P11712 490 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 CIITAP33076 1130 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 FXR1P51114 621 aaKnown RBP eCLIP15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 USP11P51784 963 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 PPIGQ13427 754 aaKnown RBP eCLIP15.72■□□□□ 0.111e-7■■□□□ 14.2
HERPUD1-218ENST00000569569 PTGISQ16647 500 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 GDF6Q6KF10 455 aaPredicted RBP15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 NSUN7Q8NE18 718 aaKnown RBP15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 IL27Q8NEV9 243 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 ZSCAN31Q96LW9 406 aaPredicted RBP15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 SDF4Q9BRK5 362 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 PHF20Q9BVI0 1012 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 JPH1Q9HDC5 661 aaPredicted RBP15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 SLC9A2Q9UBY0 812 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 ZNF215Q9UL58 517 aaPredicted RBP15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 KCNJ14Q9UNX9 436 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 TELO2Q9Y4R8 837 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 GTF3C3Q9Y5Q9 886 aa15.72■□□□□ 0.11
HERPUD1-218ENST00000569569 IGLV3-22A0A075B6J6 115 aa15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 GSTTP1A0A1W2PQM5 241 aa15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 DTNBO60941 627 aa15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 FDPSP14324 419 aaKnown RBP15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 TCF7P36402 384 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 SETQ01105 290 aaPredicted RBP15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 RABEP1Q15276 862 aa15.71■□□□□ 0.11
HERPUD1-218ENST00000569569 SHHQ15465 462 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms