RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	RPL11	P62913	178 aa	Known RBP	5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	KCNAB2	Q13303	367 aa		5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	PKN3	Q6P5Z2	889 aa		5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	ANAPC16	Q96DE5	110 aa		5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	ADO	Q96SZ5	270 aa		5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	TMEM168	Q9H0V1	697 aa		5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	MEGF9	Q9H1U4	602 aa		5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	MARCH2	Q9P0N8	246 aa		5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	SGSM2	O43147	1006 aa		5.68	□□□□□ -1.5
UBR1-209	ENST00000569243	CYP4F3	Q08477	520 aa		5.68	□□□□□ -1.5
UBR1-209	ENST00000569243	CHRNA2	Q15822	529 aa		5.68	□□□□□ -1.5
UBR1-209	ENST00000569243	EXTL1	Q92935	676 aa		5.68	□□□□□ -1.5
UBR1-209	ENST00000569243	YTHDC1	Q96MU7	727 aa	Known RBP	5.68	□□□□□ -1.5
UBR1-209	ENST00000569243	EPN3	Q9H201	632 aa		5.68	□□□□□ -1.5
UBR1-209	ENST00000569243	L2HGDH	Q9H9P8	463 aa		5.68	□□□□□ -1.5
UBR1-209	ENST00000569243	CAPN10	Q9HC96	672 aa		5.68	□□□□□ -1.5
UBR1-209	ENST00000569243		H7BY64	318 aa		5.67	□□□□□ -1.5
UBR1-209	ENST00000569243	MYO1B	O43795	1136 aa		5.67	□□□□□ -1.5
UBR1-209	ENST00000569243	INF2	Q27J81	1249 aa		5.67	□□□□□ -1.5
UBR1-209	ENST00000569243	FAM126B	Q8IXS8	530 aa		5.67	□□□□□ -1.5
UBR1-209	ENST00000569243	DIO2	Q92813	273 aa		5.67	□□□□□ -1.5
UBR1-209	ENST00000569243	ACTR10	Q9NZ32	417 aa		5.67	□□□□□ -1.5
UBR1-209	ENST00000569243	PRKAG3	Q9UGI9	489 aa		5.67	□□□□□ -1.5
UBR1-209	ENST00000569243	MEFV	O15553	781 aa	Predicted RBP	5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	CAPNS1	P04632	268 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	ITGAV	P06756	1048 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	IL13	P35225	146 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	GNL2	Q13823	731 aa	Known RBP	5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	FXN	Q16595	210 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	MILR1	Q7Z6M3	343 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	LDLRAD3	Q86YD5	345 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	TEX2	Q8IWB9	1127 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	FAM178B	Q8IXR5	827 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	KREMEN2	Q8NCW0	462 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	TRMT2B	Q96GJ1	504 aa	Known RBP	5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	GNRHR2	Q96P88	292 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	ZNF652	Q9Y2D9	606 aa		5.66	□□□□□ -1.5
UBR1-209	ENST00000569243	UNCX	A6NJT0	531 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	SMAD7	O15105	426 aa	Known RBP	5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	FOXS1	O43638	330 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	SUSD5	O60279	629 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	LTBR	P36941	435 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	EMC4	Q5J8M3	183 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	CEP68	Q76N32	757 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	ZNF227	Q86WZ6	799 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	TMEM169	Q96HH4	297 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	AGAP2	Q99490	1192 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	HSPBP1	Q9NZL4	362 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	ZDHHC9	Q9Y397	364 aa		5.65	□□□□□ -1.5
UBR1-209	ENST00000569243	HGS	O14964	777 aa	Predicted RBP	5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	CYP7B1	O75881	506 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	SSB	P05455	408 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	NKX3-2	P78367	333 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	ADAM9	Q13443	819 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	LSAMP	Q13449	338 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	SV2C	Q496J9	727 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	CCDC103	Q8IW40	242 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	BTN2A2	Q8WVV5	523 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	PPP1R14A	Q96A00	147 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	LRP2BP	Q9P2M1	347 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	COA3	Q9Y2R0	106 aa	Predicted RBP	5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	NPFFR2	Q9Y5X5	522 aa		5.64	□□□□□ -1.51
UBR1-209	ENST00000569243	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	ARNTL	O00327	626 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	PLSCR1	O15162	318 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	TADA3	O75528	432 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	SNRPB2	P08579	225 aa	Known RBP	5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	BCL6	P41182	706 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	STAT5A	P42229	794 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	GFRA1	P56159	465 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	CR1L	Q2VPA4	569 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	TCTN3	Q6NUS6	607 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	EEPD1	Q7L9B9	569 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	RCBTB1	Q8NDN9	531 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	PHOSPHO1	Q8TCT1	267 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	ZSWIM3	Q96MP5	696 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	WRNIP1	Q96S55	665 aa		5.63	□□□□□ -1.51
UBR1-209	ENST00000569243	AGRP	O00253	132 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	MAFK	O60675	156 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	DDAH1	O94760	285 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	FPR2	P25090	351 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	MLLT6	P55198	1093 aa	Predicted RBP	5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	SLC35F1	Q5T1Q4	408 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	CYP4F22	Q6NT55	531 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	GLCCI1	Q86VQ1	547 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	NLRP10	Q86W26	655 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	TOE1	Q96GM8	510 aa	Known RBP	5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	BTG4	Q9NY30	223 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	TMEFF2	Q9UIK5	374 aa	Predicted RBP	5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	DMRT1	Q9Y5R6	373 aa		5.62	□□□□□ -1.51
UBR1-209	ENST00000569243	DGKI	O75912	1065 aa		5.61	□□□□□ -1.51
UBR1-209	ENST00000569243	ERCC5	P28715	1186 aa	Predicted RBP	5.61	□□□□□ -1.51
UBR1-209	ENST00000569243	ECI1	P42126	302 aa		5.61	□□□□□ -1.51
UBR1-209	ENST00000569243	MAP4K2	Q12851	820 aa		5.61	□□□□□ -1.51
UBR1-209	ENST00000569243	LARP1B	Q659C4	914 aa	Known RBP	5.61	□□□□□ -1.51
UBR1-209	ENST00000569243	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.61	□□□□□ -1.51
UBR1-209	ENST00000569243	PPIL6	Q8IXY8	311 aa		5.61	□□□□□ -1.51
UBR1-209	ENST00000569243	KLHL36	Q8N4N3	616 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms