RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 SP2Q02086 613 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 TTC38Q5R3I4 469 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 CYFIP1Q7L576 1253 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 SLFN12Q8IYM2 578 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 KLHDC9Q8NEP7 349 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 LENG9Q96B70 501 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 FAM20AQ96MK3 541 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 RIT2Q99578 217 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 POLR3EQ9NVU0 708 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 POTEFA5A3E0 1075 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 MSH4O15457 936 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 GAS7O60861 476 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 ATP9AO75110 1047 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 CABYRO75952 493 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 FARP2O94887 1054 aaPredicted RBP10.32□□□□□ -0.76
CHD9-219ENST00000569225 SOX10P56693 466 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 KRT76Q01546 638 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 DGKDQ16760 1214 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 TMEM63BQ5T3F8 832 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 FERMT3Q86UX7 667 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 AFG1LQ8WV93 481 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 SLC5A5Q92911 643 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 SLC9A2Q9UBY0 812 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 SLC37A4O43826 429 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 EDIL3O43854 480 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 SORBS3O60504 671 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 PPFIA4O75335 1185 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 MMP3P08254 477 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 ZSCAN22P10073 491 aaPredicted RBP10.31□□□□□ -0.76
CHD9-219ENST00000569225 EN2P19622 333 aaPredicted RBP10.31□□□□□ -0.76
CHD9-219ENST00000569225 MCM7P33993 719 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 ACLYP53396 1101 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 BEX3Q00994 111 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 ITGB3BPQ13352 177 aaPredicted RBP10.31□□□□□ -0.76
CHD9-219ENST00000569225 KCNA10Q16322 511 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 CALCRLQ16602 461 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 LRCH2Q5VUJ6 765 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 TEKT3Q9BXF9 490 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 PHF24Q9UPV7 400 aa10.31□□□□□ -0.76
CHD9-219ENST00000569225 MYADML2A6NDP7 307 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 LAD1O00515 517 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 CTAGE5O15320 804 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 BMP15O95972 392 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 MYL3P08590 195 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 SP4Q02446 784 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 RESTQ13127 1097 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 ZNF174Q15697 407 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 ZNF746Q6NUN9 644 aaPredicted RBP10.3□□□□□ -0.76
CHD9-219ENST00000569225 NECAB2Q7Z6G3 386 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 SMAP1Q8IYB5 467 aaPredicted RBP10.3□□□□□ -0.76
CHD9-219ENST00000569225 ETNPPLQ8TBG4 499 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 SEPT1Q8WYJ6 367 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 GLT1D1Q96MS3 346 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 GPR20Q99678 358 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 MTG1Q9BT17 334 aaPredicted RBP10.3□□□□□ -0.76
CHD9-219ENST00000569225 C11orf49Q9H6J7 331 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 KCNMB3Q9NPA1 279 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 CEP131Q9UPN4 1083 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 ELP1O95163 1332 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 WDR64B1ANS9 1081 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 DDX39AO00148 427 aaKnown RBP10.3□□□□□ -0.76
CHD9-219ENST00000569225 DHX15O43143 795 aaKnown RBP10.3□□□□□ -0.76
CHD9-219ENST00000569225 ASGR1P07306 291 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 HOXD8P13378 290 aaPredicted RBP10.3□□□□□ -0.76
CHD9-219ENST00000569225 PRKCSHP14314 528 aaPredicted RBP10.3□□□□□ -0.76
CHD9-219ENST00000569225 PTGS1P23219 599 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 SFNP31947 248 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 JAK3P52333 1124 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 ACTR2P61160 394 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 HSDL1Q3SXM5 330 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 CCSAPQ6IQ19 270 aaPredicted RBP10.3□□□□□ -0.76
CHD9-219ENST00000569225 MIS18BP1Q6P0N0 1132 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 VTI1AQ96AJ9 217 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 KATNAL1Q9BW62 490 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 SEZ6LQ9BYH1 1024 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 AZI2Q9H6S1 392 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
CHD9-219ENST00000569225 PSMD10O75832 226 aa10.29□□□□□ -0.76
CHD9-219ENST00000569225 OR52Z1P0C646 297 aa10.29□□□□□ -0.76
CHD9-219ENST00000569225 TOB1P50616 345 aaPredicted RBP10.29□□□□□ -0.76
CHD9-219ENST00000569225 PURAQ00577 322 aaKnown RBP10.29□□□□□ -0.76
CHD9-219ENST00000569225 TMEM266Q2M3C6 531 aa10.29□□□□□ -0.76
CHD9-219ENST00000569225 CXCL17Q6UXB2 119 aa10.29□□□□□ -0.76
CHD9-219ENST00000569225 RDM1Q8NG50 284 aa10.29□□□□□ -0.76
CHD9-219ENST00000569225 PAWRQ96IZ0 340 aaKnown RBP10.29□□□□□ -0.76
CHD9-219ENST00000569225 ZNF396Q96N95 335 aaPredicted RBP10.29□□□□□ -0.76
CHD9-219ENST00000569225 ZNF215Q9UL58 517 aaPredicted RBP10.29□□□□□ -0.76
CHD9-219ENST00000569225 RBM19Q9Y4C8 960 aaKnown RBP10.29□□□□□ -0.76
CHD9-219ENST00000569225 SAMM50Q9Y512 469 aa10.29□□□□□ -0.76
CHD9-219ENST00000569225 ATP6V1DQ9Y5K8 247 aa10.29□□□□□ -0.76
CHD9-219ENST00000569225 MCM3APO60318 1980 aa10.29□□□□□ -0.76
CHD9-219ENST00000569225 A0A1W2PQ45 241 aaPredicted RBP10.28□□□□□ -0.76
CHD9-219ENST00000569225 A0A1W2PQY0 241 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 BACH1O14867 736 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 F13A1P00488 732 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 PSAPP07602 524 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 COL6A1P12109 1028 aa10.28□□□□□ -0.76
CHD9-219ENST00000569225 TCF7P36402 384 aaPredicted RBP10.28□□□□□ -0.76
CHD9-219ENST00000569225 NUCB2P80303 420 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms