RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ENC1O14682 589 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 GNA14O95837 355 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 SREBF1P36956 1147 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 STAT3P40763 770 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 SLC12A3P55017 1021 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 SNAP25P60880 206 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 JAG1P78504 1218 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 CYP27A1Q02318 531 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 IKQ13123 557 aaPredicted RBP10.69□□□□□ -0.7
TCF4-240ENST00000568673 USH1GQ495M9 461 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 HERC4Q5GLZ8 1057 aaPredicted RBP10.69□□□□□ -0.7
TCF4-240ENST00000568673 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 CATSPER3Q86XQ3 398 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 LENG9Q96B70 501 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 FAM20AQ96MK3 541 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 PURBQ96QR8 312 aaKnown RBP10.69□□□□□ -0.7
TCF4-240ENST00000568673 TSGA10Q9BZW7 698 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 ARHGAP20Q9P2F6 1191 aa10.69□□□□□ -0.7
TCF4-240ENST00000568673 ZNF646O15015 1829 aaPredicted RBP10.69□□□□□ -0.7
TCF4-240ENST00000568673 FAM86B1E9PN63 330 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 ZNF263O14978 683 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 LCA5LO95447 670 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 TUBBP07437 444 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 FAM86B2P0C5J1 330 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 RPA1P27694 616 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 CIITAP33076 1130 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 MARSP56192 900 aaKnown RBP10.68□□□□□ -0.7
TCF4-240ENST00000568673 LONRF2Q1L5Z9 754 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 ARSHQ5FYA8 562 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 NCAPH2Q6IBW4 605 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 ERMNQ8TAM6 284 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 SCFD1Q8WVM8 642 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 CSRNP1Q96S65 589 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 FUT8Q9BYC5 575 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 FGFBP2Q9BYJ0 223 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 TBC1D7Q9P0N9 293 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 STK24Q9Y6E0 443 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 COL2A1P02458 1487 aaPredicted RBP10.68□□□□□ -0.7
TCF4-240ENST00000568673 NPHP3-ACAD11A0A0J9YXS1 232 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 A0A1W2PRG0 241 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 ATP1A1P05023 1023 aaKnown RBP10.68□□□□□ -0.7
TCF4-240ENST00000568673 PLEKP08567 350 aaPredicted RBP10.68□□□□□ -0.7
TCF4-240ENST00000568673 FAM193AP78312 1265 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 KCNMA1Q12791 1236 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 RRP1BQ14684 758 aaKnown RBP10.68□□□□□ -0.7
TCF4-240ENST00000568673 RRAGAQ7L523 313 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 SUPT20HQ8NEM7 779 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 NEK11Q8NG66 645 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 CNKSR2Q8WXI2 1034 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 BAP1Q92560 729 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 PNKPQ96T60 521 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 UBXN6Q9BZV1 441 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 TANGO6Q9C0B7 1094 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 KCTD10Q9H3F6 313 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 ST7Q9NRC1 585 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 HDAC6Q9UBN7 1215 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 HERC5Q9UII4 1024 aaKnown RBP10.68□□□□□ -0.7
TCF4-240ENST00000568673 PRDM4Q9UKN5 801 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 DNM3Q9UQ16 869 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 DUSP10Q9Y6W6 482 aa10.68□□□□□ -0.7
TCF4-240ENST00000568673 ANO9A1A5B4 782 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 POTEFA5A3E0 1075 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 PIK3CDO00329 1044 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 OPLAHO14841 1288 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 USO1O60763 962 aaKnown RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 KRT18P05783 430 aaKnown RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 POTEIP0CG38 1075 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 SPATA31C1P0DKV0 1188 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 ERCC3P19447 782 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 CCDC40Q4G0X9 1142 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 ZNF772Q68DY9 489 aaPredicted RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 POTEGQ6S5H5 508 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 POTEEQ6S8J3 1075 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 CACNA2D4Q7Z3S7 1137 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 KRT26Q7Z3Y9 468 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 TEX2Q8IWB9 1127 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 SECISBP2LQ93073 1101 aaKnown RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 YDJCA8MPS7 323 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 ERLIN1O75477 346 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 CYP3A4P08684 503 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 EIF4A3P38919 411 aaKnown RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 KIF11P52732 1056 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 PSMC6P62333 389 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 RAD51AP2Q09MP3 1159 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 BEND6Q5SZJ8 279 aaPredicted RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 TRIM59Q8IWR1 403 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 NELFCDQ8IXH7 590 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 ZC3H3Q8IXZ2 948 aaKnown RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 SYT2Q8N9I0 419 aaPredicted RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 NOA1Q8NC60 698 aaKnown RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 TRIM58Q8NG06 486 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 RPGRIP1Q96KN7 1286 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 IFIH1Q9BYX4 1025 aaKnown RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 NUCKS1Q9H1E3 243 aaKnown RBP10.67□□□□□ -0.7
TCF4-240ENST00000568673 DEF6Q9H4E7 631 aa10.67□□□□□ -0.7
TCF4-240ENST00000568673 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms